PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MDP0000289260

Organism

Malus domestica

Taxonomic ID

3750

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus

Family

BES1

Protein Properties

Length: 1271aa MW: 141814 Da PI: 9.0728

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MDP0000289260	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	95.2	1.4e-29	857	906	1	50
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneV 50 ++++r+ptwkErEnnkrRERrRRaiaaki+ GLR++Gnyklpk++Dnne MDP0000289260 857 TSGTRMPTWKERENNKRRERRRRAIAAKIFXGLRMYGNYKLPKHCDNNEX 906 5899********************************************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:3.80.10.10	3.4E-12	61	392	IPR032675	Leucine-rich repeat domain, L domain-like
PROSITE profile	PS50181	8.862	62	110	IPR001810	F-box domain
SuperFamily	SSF81383	6.8E-10	63	105	IPR001810	F-box domain
SuperFamily	SSF52058	1.97E-8	170	422	IPR032675	Leucine-rich repeat domain, L domain-like
Pfam	PF08387	5.1E-8	423	455	IPR006566	FBD domain
Pfam	PF05687	1.3E-35	858	1025	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005515	Molecular Function	protein binding

Sequence ? help Back to Top
Protein Sequence Length: 1271 aa Download sequence Send to blast
MAYKSQHIPS KGLSESNFIN LAXGXLEGSS LISXFLLCSK DSKSFLGHLE RFRVQMSKAR 60 VKDRISGLPD PXLCHMLSFL PTKXAMRCSI LSTRWKNIWN SVPNLDFENK DKSETVGFMN 120 FVDRILKFPG SIDIQKFRLH CSYVGDYTRI DGWIRTAIRR KAVELDLGVS NTGKTLELPK 180 SVFMCKTLVV LKVKSNVITY NPPTSGCFPS LKFLHITAEG PYCDSVENLL SCCPVLEDLI 240 IDITLGVRGC NFKISASELK RLIITFHHLL IQLGGEKVFI NAPKLENFDV KEDILANYCL 300 ENAKSLVKAN VDLYCYCVHR DVEFVTNATA LLXGISNVKY LCLSARVLWD HCLPAFDNLS 360 ELKLVLYDSY NWDLLMKLLD KSPNLEHLVL EHKEDKDCVQ HYSFGQHSNF KCNLPSEFRW 420 HTPEYVPACL TSHLKTITIR GFKGYPHEKK GARFFTSSHQ TENQTRPRKP LDLLFKEAVE 480 LSPKPENSDS EXETKDNQLK KSLRDLEEEV RSLRAENKAK KREPNSDSEG EVSLYAVFTN 540 KKPADGSSRK RMAVTRERSN VLKDLSQDME VXASHLFKEG YFKDANFLFV NGDRLDISCF 600 NNSYGRSFIR FAVESFARDN QVIANCQRVG LTGVSIILII TLEXFNLPHA MSDFHQRGLN 660 RSLVRVMSCC LTVELRSRTM VVRLGLEKGG PPWLCPSLAR KSVFGLKECA NFLTFQKTKF 720 CKSFCSLIFC RARRWRDVGP EGGAAGVGSR EXPATHDACI AMGMEQTPGP RAVRHIRSNS 780 SILXKIQVPR RXQLTPILPF NAAVSPXLLP SASEDSILTL LLSSQLKISL RGGVFSVPAS 840 NEGLLDRRRR AARSEMTSGT RMPTWKEREN NKRRERRRRA IAAKIFXGLR MYGNYKLPKH 900 CDNNEXCASV RAXEXELVGN XDHLQHEVAH VSXVANLRRV QRFLPGKCPE SXXADKWEGC 960 KPVEHMDVMG GSTLASPSSS FLPSNCASYN PSPGSSSFPS PTSSSYAXNX NADGRSLIPW 1020 LKNLSSASSS ASSSKLPNLY IHGGSISAPV TPPLSSPTAR TPRMRIDWDD QCAPPGWARQ 1080 QFPFMPSSTP PSPGRQIVPD PEWFAGIPVP RGPNSPTFSL VSLNPFGFKD EVLAGGGSRM 1140 WTPGQSGTCS PAIAAGSDHT ADIPMSEVIS DEFAFGCNTT GLVKAWEGEK IHEECGSDDL 1200 ELTLGSSRTR SAQSEFVSCY XASKGLRKVK ITCYRTNVDS LSVRFQIKGR EKGIKHIATE 1260 XIGATTKGMS L

Sequence ? help Back to Top

Protein Sequence Length: 1271 aa Download sequence Send to blast

MAYKSQHIPS KGLSESNFIN LAXGXLEGSS LISXFLLCSK DSKSFLGHLE RFRVQMSKAR  60
VKDRISGLPD PXLCHMLSFL PTKXAMRCSI LSTRWKNIWN SVPNLDFENK DKSETVGFMN  120
FVDRILKFPG SIDIQKFRLH CSYVGDYTRI DGWIRTAIRR KAVELDLGVS NTGKTLELPK  180
SVFMCKTLVV LKVKSNVITY NPPTSGCFPS LKFLHITAEG PYCDSVENLL SCCPVLEDLI  240
IDITLGVRGC NFKISASELK RLIITFHHLL IQLGGEKVFI NAPKLENFDV KEDILANYCL  300
ENAKSLVKAN VDLYCYCVHR DVEFVTNATA LLXGISNVKY LCLSARVLWD HCLPAFDNLS  360
ELKLVLYDSY NWDLLMKLLD KSPNLEHLVL EHKEDKDCVQ HYSFGQHSNF KCNLPSEFRW  420
HTPEYVPACL TSHLKTITIR GFKGYPHEKK GARFFTSSHQ TENQTRPRKP LDLLFKEAVE  480
LSPKPENSDS EXETKDNQLK KSLRDLEEEV RSLRAENKAK KREPNSDSEG EVSLYAVFTN  540
KKPADGSSRK RMAVTRERSN VLKDLSQDME VXASHLFKEG YFKDANFLFV NGDRLDISCF  600
NNSYGRSFIR FAVESFARDN QVIANCQRVG LTGVSIILII TLEXFNLPHA MSDFHQRGLN  660
RSLVRVMSCC LTVELRSRTM VVRLGLEKGG PPWLCPSLAR KSVFGLKECA NFLTFQKTKF  720
CKSFCSLIFC RARRWRDVGP EGGAAGVGSR EXPATHDACI AMGMEQTPGP RAVRHIRSNS  780
SILXKIQVPR RXQLTPILPF NAAVSPXLLP SASEDSILTL LLSSQLKISL RGGVFSVPAS  840
NEGLLDRRRR AARSEMTSGT RMPTWKEREN NKRRERRRRA IAAKIFXGLR MYGNYKLPKH  900
CDNNEXCASV RAXEXELVGN XDHLQHEVAH VSXVANLRRV QRFLPGKCPE SXXADKWEGC  960
KPVEHMDVMG GSTLASPSSS FLPSNCASYN PSPGSSSFPS PTSSSYAXNX NADGRSLIPW  1020
LKNLSSASSS ASSSKLPNLY IHGGSISAPV TPPLSSPTAR TPRMRIDWDD QCAPPGWARQ  1080
QFPFMPSSTP PSPGRQIVPD PEWFAGIPVP RGPNSPTFSL VSLNPFGFKD EVLAGGGSRM  1140
WTPGQSGTCS PAIAAGSDHT ADIPMSEVIS DEFAFGCNTT GLVKAWEGEK IHEECGSDDL  1200
ELTLGSSRTR SAQSEFVSCY XASKGLRKVK ITCYRTNVDS LSVRFQIKGR EKGIKHIATE  1260
XIGATTKGMS L

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Mdo.21696	2e-56	bud\| leaf\| stem

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF2661	33	75

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78700.1	1e-89	BES1/BZR1 homolog 4

Link Out ? help Back to Top
Phytozome	MDP0000289260