PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000284686
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family G2-like
Protein Properties Length: 464aa    MW: 52236.7 Da    PI: 8.3698
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000284686genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like31.15.4e-104302955
        G2-like 29 PktilelmkvkgLtlehvkSHLQkYRl 55
                   P+ il+l +  gL+++hvkSHLQ+YR+
  MDP0000284686  4 PSLILQLXNXRGLSISHVKSHLQMYRS 30
                   999***********************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.607.6E-8431IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 464 aa     Download sequence    Send to blast
EQLPSLILQL XNXRGLSISH VKSHLQMYRS KKLDGNGQVL SEKHESKRGR DNISCKVHQT  60
INQPCRHVYF GMDNGSIVVT TSPHDCQSQP QPDFKAVSRS SSXLNEELVQ GNNSNKSMDT  120
ILRTVPINPS RLLEDKRWPP SETINQQQWR AKRIPAAKIS WSDDCNGSQS DHLMHHMHTT  180
PRLIRESHNI RPPNWNLGES RNIRQFPSNS HNSITNSSCY KTEFEPPFGF ELNEEKSSKY  240
KGWMPQLELC LSQSVENYEE TKIISRHRMN RIIQMRTKSM NTSRGDLSIV DYLDKVNVIV  300
DNLAVSRAPF FESDLVAIIM SKVGPHPLCG HLSSSNGILG PGSSGFTLAS PTFSSFGRIQ  360
CQICQRYGHS AIDCFNRLNM SYEGRVPSSH HQAYVVVPSC RASNTASAAP SVQQWLFDSS  420
ANSHITNDVG QLHNPREYHG TDQIRGVHVG PGFADGDDHF TRPE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008371480.20.0uncharacterized protein LOC103434890
RefseqXP_008371482.20.0uncharacterized protein LOC103434890
RefseqXP_017187622.20.0uncharacterized protein LOC103434890
RefseqXP_017187623.20.0uncharacterized protein LOC103434890
RefseqXP_028958978.10.0uncharacterized protein LOC103434890
RefseqXP_028958980.10.0uncharacterized protein LOC103434890
TrEMBLA0A498JUD00.0A0A498JUD0_MALDO; Uncharacterized protein
STRINGXP_008371480.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF30123270
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.17e-10G2-like family protein