PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000276536
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family ERF
Protein Properties Length: 420aa    MW: 46621.8 Da    PI: 4.3085
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000276536genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.95.9e-194796255
            AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                   ++ GVr+++ +grWvAeI+d      ++ r++lg+f+taeeAa+a+++a+  l+g
  MDP0000276536 47 RFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTAEEAARAYDEAACLLRG 96
                   789******.7*********33....35**********************99998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.39E-3146103No hitNo description
PROSITE profilePS5103219.55947104IPR001471AP2/ERF domain
PfamPF008471.1E-134796IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.3E-2747103IPR001471AP2/ERF domain
SMARTSM003807.8E-3547111IPR001471AP2/ERF domain
SuperFamilySSF541714.12E-1947104IPR016177DNA-binding domain
PRINTSPR003676.3E-84859IPR001471AP2/ERF domain
PRINTSPR003676.3E-87086IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 420 aa     Download sequence    Send to blast
MARKRKVSEG VEDYTTTSGE GTMAWDEMVK EASAVAELGG ARRARKRFVG VRQRPSGRWV  60
AEIKDTIQKI RVWLGTFDTA EEAARAYDEA ACLLRGANTR TNFWPCSQSP STTPALPSKI  120
TNLLLQRLKA RNNAISCSPP PXAPLPINHH YDQNLHEQAT ETDFSETQYT DFLNDPEDYY  180
ITSNNNQEII TDHISASSID YMTSSFESCL TDKETDHMEY GNLSEVAQQT CSGEDANFAA  240
EGSEADVDQE QEEEEEVNGD QVGVMDFQFV DDIGASNSXY YSPSPFEIAE EIEEPVLEAE  300
SYADEPSMLR AAMKRMKYER KFSASLYAFN GIPECLKLRI GSGNGKGRGV SECLSNLQRA  360
CSNKNKEEEV VTVAAAEHPR NDSKQEEHGS SSMDVSLSSD GELSLWGSLD LQPICFLSTK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008379843.20.0ethylene-responsive transcription factor ERN2-like
TrEMBLA0A498J4G80.0A0A498J4G8_MALDO; Uncharacterized protein
STRINGXP_008379843.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33383267
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.13e-22related to AP2 11