PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MDP0000266040

Organism

Malus domestica

Taxonomic ID

3750

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus

Family

G2-like

Protein Properties

Length: 389aa MW: 43681.4 Da PI: 9.7279

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MDP0000266040	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	54.2	3.2e-17	104	142	16	54
G2-like 16 eaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 ve+LGG ++AtPk +l++m+vkgL ++hvk HLQ+Y MDP0000266040 104 YSVERLGGDQRATPKMVLQTMNVKGLNISHVKXHLQMYT 142 579***********************************5 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
TIGRFAMs	TIGR01557	4.9E-10	105	142	IPR006447	Myb domain, plants
Gene3D	G3DSA:1.10.10.60	9.9E-14	105	144	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence Send to blast
MSAPEKTDHH RSITGDSGAS VSDDSDDNQS WHSMSDSXNV XRKSCGSDCS VNEVDLESGL 60 LEVKKKHSSR EASSRPRLPP SFSGPRQSSS DDRQLVEIIP VVIYSVERLG GDQRATPKMV 120 LQTMNVKGLN ISHVKXHLQM YTSMKHEQGI QAALAAKKNE SEMRQWKREG EYRQVLDRAP 180 SSEWWRRRGM APIELMSKSH AATSDQSSHQ GSNTYVAPSP TLSQSLSFKD SVETVRNVFG 240 RWRKSVGEPT KKAEDLAGNT WQLLKTSPSF ADAAMGRIAL GTKVLAEGGY EKIFRSTFKT 300 TPEEQLQNSF ACYLSTSVQS WEFYMFLLQS LRIAVIIPFR TKLRAKSSSW SSVSLHNLQL 360 HHHHSPENNA VMGYLQQPTW TKGITFRMC

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence Send to blast

MSAPEKTDHH RSITGDSGAS VSDDSDDNQS WHSMSDSXNV XRKSCGSDCS VNEVDLESGL  60
LEVKKKHSSR EASSRPRLPP SFSGPRQSSS DDRQLVEIIP VVIYSVERLG GDQRATPKMV  120
LQTMNVKGLN ISHVKXHLQM YTSMKHEQGI QAALAAKKNE SEMRQWKREG EYRQVLDRAP  180
SSEWWRRRGM APIELMSKSH AATSDQSSHQ GSNTYVAPSP TLSQSLSFKD SVETVRNVFG  240
RWRKSVGEPT KKAEDLAGNT WQLLKTSPSF ADAAMGRIAL GTKVLAEGGY EKIFRSTFKT  300
TPEEQLQNSF ACYLSTSVQS WEFYMFLLQS LRIAVIIPFR TKLRAKSSSW SSVSLHNLQL  360
HHHHSPENNA VMGYLQQPTW TKGITFRMC

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008341714.2	1e-142	GLABRA2 expression modulator-like
STRING	XP_008345129.1	1e-141	(Malus domestica)
STRING	XP_008349693.1	1e-141	(Malus domestica)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40260.1	7e-14	G2-like family protein

Link Out ? help Back to Top
Phytozome	MDP0000266040