PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MDP0000262747

Organism

Malus domestica

Taxonomic ID

3750

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus

Family

G2-like

Protein Properties

Length: 241aa MW: 28550.1 Da PI: 8.7783

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MDP0000262747	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	66.6	4.2e-21	90	142	2	54
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 +rl Wtp+LH++F++ave LGG++ AtPk+i lm ++ +tl ++kS LQ R MDP0000262747 90 ERLSWTPDLHRKFMRAVEILGGEDYATPKNIQSLMRIPEITLPQIKSRLQLVR 142 69************************************************877 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	1.6E-18	89	143	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	1.2E-17	91	144	IPR006447	Myb domain, plants
SuperFamily	SSF46689	3.85E-12	91	146	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 241 aa Download sequence Send to blast
MKNKFEASSS RNMDRYVEET WEEFEQVENF YTDAAHEVTN ERFGAISEYR NSRSVKRFEH 60 RSYPEETIYQ RRTTTTVTRP TTTTVTRPCE RLSWTPDLHR KFMRAVEILG GEDYATPKNI 120 QSLMRIPEIT LPQIKSRLQL VRRRSRSCYP DYGTSFLPED WDKFLVKYLY PSFTPTVGLF 180 VAGSVGYGVV KYLQNEELKG RENETGNWTV YVYANDLEKG DRRPWLPCTK DARRCRYSHL 240 E

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Mdo.2765	2e-53	fruit\| leaf

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04030.1	3e-11	G2-like family protein

Link Out ? help Back to Top
Phytozome	MDP0000262747