PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000255392
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family TALE
Protein Properties Length: 309aa    MW: 34396.3 Da    PI: 8.2396
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000255392genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox30.37.3e-101261631954
                    HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
       Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                    Fe   ++yp+ +++  LA+++gL+ +qV++WF N R +
  MDP0000255392 126 FEHflHPYPTDTDKHMLATQTGLSRNQVSNWFINARVR 163
                    664459******************************87 PP

2BELL53.94.4e-181433072
           BELL 30 lqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72
                   +q+v++sFe v gl sa+pY+ +Al+a+SrhFrcL + i++q+
  MDP0000255392  1 MQMVVASFESVXGLSSATPYICMALNAVSRHFRCLTNSIKDQL 43
                   9***************************************996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF075262.4E-12139IPR006563POX domain
PROSITE profilePS5007111.888104167IPR001356Homeobox domain
CDDcd000861.08E-11107168No hitNo description
SMARTSM003891.2E-7107171IPR001356Homeobox domain
SuperFamilySSF466893.46E-17109174IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.5E-27110171IPR009057Homeodomain-like
PfamPF059201.1E-18124163IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    Send to blast
MQMVVASFES VXGLSSATPY ICMALNAVSR HFRCLTNSIK DQLKHTRKAL GEEYMSSSVT  60
AAGTAECSSK GEKNFAKLKY MGLGFQKHNK SGGGSLVGFS EPQQHVWRPQ RGLPERSVAI  120
LRTWLFEHFL HPYPTDTDKH MLATQTGLSR NQVSNWFINA RVRVWKPMVE EIHMLETRGG  180
SFEAGQDPII KDGNSANEGT SSRPNNDHQL SMNVMPNRQL ECSVDAEQRN QEMKRSRLEC  240
QVPSNMDGGL MGFVQDQRGG FEAGGLGAVS LTLGLRHGVE SAQQQQQLQQ QEDQLRXQLG  300
GQMIRDYAG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4xrs_A2e-15113170158Homeobox protein Meis1
4xrs_B2e-15113170158Homeobox protein Meis1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009367039.10.0PREDICTED: BEL1-like homeodomain protein 9
TrEMBLA0A498KB130.0A0A498KB13_MALDO; Uncharacterized protein
STRINGXP_008355186.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF34813257
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27990.17e-62BEL1-like homeodomain 8