PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MDP0000248927

Organism

Malus domestica

Taxonomic ID

3750

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus

Family

G2-like

Protein Properties

Length: 2235aa MW: 248098 Da PI: 6.1904

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MDP0000248927	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.6	2.4e-32	2008	2062	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWtpeLHe+Fveav+qLGGse+AtPk +l+lmkv+ Lt++hvkSHLQkYR+ MDP0000248927 2008 KARMRWTPELHESFVEAVNQLGGSERATPKGVLKLMKVEHLTIYHVKSHLQKYRT 2062 68****************************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF10440	7.7E-23	156	210	IPR018848	WIYLD domain
Gene3D	G3DSA:2.170.270.10	8.1E-41	650	845	No hit	No description
SuperFamily	SSF82199	4.91E-42	696	887	No hit	No description
PROSITE profile	PS50280	10.871	754	917	IPR001214	SET domain
SMART	SM00317	4.4E-10	754	870	IPR001214	SET domain
Pfam	PF00856	4.1E-7	766	846	IPR001214	SET domain
Pfam	PF11107	3.1E-17	1135	1474	No hit	No description
PROSITE profile	PS51294	10.212	2005	2065	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	2.1E-30	2006	2064	IPR009057	Homeodomain-like
SuperFamily	SSF46689	1.72E-16	2007	2062	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	1.2E-23	2008	2062	IPR006447	Myb domain, plants
Pfam	PF00249	2.8E-8	2010	2061	IPR001005	SANT/Myb domain
Pfam	PF14379	3.2E-25	2093	2140	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding
GO:0005515	Molecular Function	protein binding
GO:0018024	Molecular Function	histone-lysine N-methyltransferase activity

Sequence ? help Back to Top
Protein Sequence Length: 2235 aa Download sequence Send to blast
MWNFFSLSLS LFFFFFFLSS LPFSPKSPPP NSRFAFLDQP IFVLDPKNGQ VGVVPTVDVL 60 QKFERQDLVV HLHVELVLSG TAQTAYDGGC LMCSGVFLNI MLDLRGDNRV IGDEEMRDGG 120 GCKGKREGKR LREGTFCIGK LTVEXSGERT VMAPNPRVSA AFKAMAELGI NEKQVKPVLK 180 NLLRLFDRNW ELIEEENYRV LLDAIFDAED TQVGSVAPFL VFLNLVAIVS DISVAAFPDI 240 LCPVTYQEED MEEEPQLRRE PARPSKRIHS SGDEGSSQKK KSTNADPEDN MGEALTQPHQ 300 PERPLKRLRK THGGVLSPSP STCNPMLPRD ITRSPDSRAE LQQPVSPHLG NKNKGKQPVV 360 SNPLAQHGKR STESGIIFLP KQRVDTHQLM KPKDEPFTDD MAQDEVPIAV ILPDPSSKEN 420 PPIQNGATRE QNDQEPVAXQ ERESTRSDII ASSNERNTNF EFATVEEESS NXEVASSPLG 480 EVKLSFSCSS AVGRLDFHMP KLDAVIKLTE EKYLHSYKII DPNFSLKNLL GHMCESFLEL 540 GTNSNGESQD GSVSVSPNLD ALKKTTAXDF VHGTKESLNG PVSIECPTAV TASQVPRLPL 600 SLNGVGECRQ AGERADSNGF AEVDKEGELE DSRGLVVVQH CDLPSDDLRS YHDINDXTKG 660 EERVKIPWTE GDFAYTREGL LNDDFLEECI SMTRNPQQHR PFYCKXCPLE RVKNDDCLEP 720 CKGHLRRQFX KECWSKCGCH RQCGNRVVQR GLNWKLQVFF TSEGKGWGLR TLEDLPKGAF 780 VCEYVGEVLT SKELHERNIK SSRSGKRPYP VLLDANWASK ADLRDEEALC LDATNYGNVA 840 RFINHXSIDF TKPVLLLRSC TDYGIDFDDH DHPVKVFQCL CGSKFCRNMK RSNMYRTTRS 900 PLCRMLVETE QTHICTNRHK LFATICFIRA GXNGIRVGNS GVVELPRAVE ARGGDRDRNG 960 VFEALECPDY EGAVGPGAGE AHVEXEGGLG LXGDLVGXGA EFGGGSGVAE GGVGGGELGH 1020 HDAPRGVPGG SDGGDEEAXR EGRXPQELGD GGEEGSRVRR LGRLAVAGHF SADVADAGFV 1080 VGPSGGAGSV ERRSWELGGA DQGHLRLLEL GQLSLLDXRG GRKKTMGWRH PQISMEEVVN 1140 LIKGFVDILI LLSGYXSSGR IAHWDSXNVK KAFQWGLFFE QVFGSFSCSD DYASSVEELD 1200 AXLSEMTSAA SFPKGLAHLS SXTLAKARRF VLEHLIHTLP LRDVHLXALL TATVEXDLEE 1260 LSETEHDFLN AYFNKLKSQN TLLDQRIAPA TTTENCGSDG FTRYVVQELL RRWSAASFIT 1320 SVEAGLDVLS QSVRHSXWSE FDXNLLXEQL KHENAPEIVE WLLGSMTWNX WKSKNLSYFL 1380 DKRTIRLVSG ASXIFSAPKI QWVQIFERLN LNISAGSSDD GLCETIELLL LGCVTSRWTS 1440 LIEXLMSISH DXKNILEQYN EVCNLLHGRS TDLKSKQEAT CTKGSDILEY LSGFLGNQMH 1500 QLWKVSPVLA AVAIPSWSPL FRFYLSEIQI QFQGDFSTMR CCNCANDKKE HNDSSSVVLP 1560 VSSYTIILAA SFCFHPSLYK MAHGQGGGGT KNMKVSCISV CWKLQCSKPL KRIASAGSEV 1620 KLVGNQSSAS SVGYCRGSYL LRQLFWKLKS QWKQGGDWMS LXYFCFRKIQ TRREKLNGTC 1680 LEAWLREGKA PALEHTLKLF HEIKDSGIKI FLISSRREKF RVGYHXWTGL ILRQKLMTPF 1740 GGFAVNNKQK MEARPAMSIR RSAANQLAHM GVPAAMSSSL PVLPTSLEET HPNLPDSQQV 1800 SMERELMTRP VVHAGHLTSN SGVVGHIFSS SSGFSTDLHY STHSPHEKQQ KNSPFISQSP 1860 HSGFLQSTES CPYPKENSGS WCTDPLPGFL DFPVNNHIEN SQIESSSCSG IMAADEFAKR 1920 HDWQEWADQL ITDDDALTSN WNELLVDNVT DLEQKMKYQA PKPSPNFSVQ QSQVHQQQPA 1980 SSGEIIPAPS REIISVTAPS SANSATAKAR MRWTPELHES FVEAVNQLGG SERATPKGVL 2040 KLMKVEHLTI YHVKSHLQKY RTARYRPESS EGASEKKLTP IEEMTSLDLK TGIEITEALR 2100 LQMEVQKRLH EQLEIQRNLQ LRIEEQGKYL QMMFEKQCKS GIDTLNPSSS NLDDPSAQPS 2160 DATQVCLDKS EXESSKLGQG ETQTDPVKAN STSSGGSQEP EGKQKAPETE TVPQNPEPDV 2220 GEASSQPPXR AKIKE

Sequence ? help Back to Top

Protein Sequence Length: 2235 aa Download sequence Send to blast

MWNFFSLSLS LFFFFFFLSS LPFSPKSPPP NSRFAFLDQP IFVLDPKNGQ VGVVPTVDVL  60
QKFERQDLVV HLHVELVLSG TAQTAYDGGC LMCSGVFLNI MLDLRGDNRV IGDEEMRDGG  120
GCKGKREGKR LREGTFCIGK LTVEXSGERT VMAPNPRVSA AFKAMAELGI NEKQVKPVLK  180
NLLRLFDRNW ELIEEENYRV LLDAIFDAED TQVGSVAPFL VFLNLVAIVS DISVAAFPDI  240
LCPVTYQEED MEEEPQLRRE PARPSKRIHS SGDEGSSQKK KSTNADPEDN MGEALTQPHQ  300
PERPLKRLRK THGGVLSPSP STCNPMLPRD ITRSPDSRAE LQQPVSPHLG NKNKGKQPVV  360
SNPLAQHGKR STESGIIFLP KQRVDTHQLM KPKDEPFTDD MAQDEVPIAV ILPDPSSKEN  420
PPIQNGATRE QNDQEPVAXQ ERESTRSDII ASSNERNTNF EFATVEEESS NXEVASSPLG  480
EVKLSFSCSS AVGRLDFHMP KLDAVIKLTE EKYLHSYKII DPNFSLKNLL GHMCESFLEL  540
GTNSNGESQD GSVSVSPNLD ALKKTTAXDF VHGTKESLNG PVSIECPTAV TASQVPRLPL  600
SLNGVGECRQ AGERADSNGF AEVDKEGELE DSRGLVVVQH CDLPSDDLRS YHDINDXTKG  660
EERVKIPWTE GDFAYTREGL LNDDFLEECI SMTRNPQQHR PFYCKXCPLE RVKNDDCLEP  720
CKGHLRRQFX KECWSKCGCH RQCGNRVVQR GLNWKLQVFF TSEGKGWGLR TLEDLPKGAF  780
VCEYVGEVLT SKELHERNIK SSRSGKRPYP VLLDANWASK ADLRDEEALC LDATNYGNVA  840
RFINHXSIDF TKPVLLLRSC TDYGIDFDDH DHPVKVFQCL CGSKFCRNMK RSNMYRTTRS  900
PLCRMLVETE QTHICTNRHK LFATICFIRA GXNGIRVGNS GVVELPRAVE ARGGDRDRNG  960
VFEALECPDY EGAVGPGAGE AHVEXEGGLG LXGDLVGXGA EFGGGSGVAE GGVGGGELGH  1020
HDAPRGVPGG SDGGDEEAXR EGRXPQELGD GGEEGSRVRR LGRLAVAGHF SADVADAGFV  1080
VGPSGGAGSV ERRSWELGGA DQGHLRLLEL GQLSLLDXRG GRKKTMGWRH PQISMEEVVN  1140
LIKGFVDILI LLSGYXSSGR IAHWDSXNVK KAFQWGLFFE QVFGSFSCSD DYASSVEELD  1200
AXLSEMTSAA SFPKGLAHLS SXTLAKARRF VLEHLIHTLP LRDVHLXALL TATVEXDLEE  1260
LSETEHDFLN AYFNKLKSQN TLLDQRIAPA TTTENCGSDG FTRYVVQELL RRWSAASFIT  1320
SVEAGLDVLS QSVRHSXWSE FDXNLLXEQL KHENAPEIVE WLLGSMTWNX WKSKNLSYFL  1380
DKRTIRLVSG ASXIFSAPKI QWVQIFERLN LNISAGSSDD GLCETIELLL LGCVTSRWTS  1440
LIEXLMSISH DXKNILEQYN EVCNLLHGRS TDLKSKQEAT CTKGSDILEY LSGFLGNQMH  1500
QLWKVSPVLA AVAIPSWSPL FRFYLSEIQI QFQGDFSTMR CCNCANDKKE HNDSSSVVLP  1560
VSSYTIILAA SFCFHPSLYK MAHGQGGGGT KNMKVSCISV CWKLQCSKPL KRIASAGSEV  1620
KLVGNQSSAS SVGYCRGSYL LRQLFWKLKS QWKQGGDWMS LXYFCFRKIQ TRREKLNGTC  1680
LEAWLREGKA PALEHTLKLF HEIKDSGIKI FLISSRREKF RVGYHXWTGL ILRQKLMTPF  1740
GGFAVNNKQK MEARPAMSIR RSAANQLAHM GVPAAMSSSL PVLPTSLEET HPNLPDSQQV  1800
SMERELMTRP VVHAGHLTSN SGVVGHIFSS SSGFSTDLHY STHSPHEKQQ KNSPFISQSP  1860
HSGFLQSTES CPYPKENSGS WCTDPLPGFL DFPVNNHIEN SQIESSSCSG IMAADEFAKR  1920
HDWQEWADQL ITDDDALTSN WNELLVDNVT DLEQKMKYQA PKPSPNFSVQ QSQVHQQQPA  1980
SSGEIIPAPS REIISVTAPS SANSATAKAR MRWTPELHES FVEAVNQLGG SERATPKGVL  2040
KLMKVEHLTI YHVKSHLQKY RTARYRPESS EGASEKKLTP IEEMTSLDLK TGIEITEALR  2100
LQMEVQKRLH EQLEIQRNLQ LRIEEQGKYL QMMFEKQCKS GIDTLNPSSS NLDDPSAQPS  2160
DATQVCLDKS EXESSKLGQG ETQTDPVKAN STSSGGSQEP EGKQKAPETE TVPQNPEPDV  2220
GEASSQPPXR AKIKE

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	3e-31	2007	2066	1	60	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	3e-31	2007	2066	1	60	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	3e-31	2007	2066	1	60	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	3e-31	2007	2066	1	60	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	3e-31	2007	2066	1	60	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	3e-31	2007	2066	1	60	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	3e-31	2007	2066	1	60	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	3e-31	2007	2066	1	60	Protein PHOSPHATE STARVATION RESPONSE 1

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Mdo.893	0.0	bud\| fruit\| leaf

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28610.1	1e-107	phosphate starvation response 1

Link Out ? help Back to Top
Phytozome	MDP0000248927