PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000244873
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family EIL
Protein Properties Length: 358aa    MW: 39593.4 Da    PI: 4.7598
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000244873genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN361.62.4e-191140217329
                    TGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX........XXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXX.. CS
           EIN3 217 msptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss........slrkqspkvtlsceqkedvegkkeskikhvqavktta.. 302
                    msp+i++ir+++rqsk+lqdkm+akes+++l vl++ee+++++ s+++         ++ +++++  +s+++++dv+g+++   + +++++  +  
  MDP0000244873   1 MSPDIAKIRKHVRQSKCLQDKMTAKESAIWLGVLSREESLIRQSSSDNGtsgiiempQSGRGEKQAAASSNSDYDVDGTDDGLGSVSSSKDD-Mrn 95 
                    89*********************************************444568877766779999************666655442222222.223 PP

                    ...................XXXXXXXXXXXXXXXXXXXXX...... CS
           EIN3 303 ...................gfpvvrkrkkkpsesakvsskevsrtc 329
                                       + + + ++k +++++a v ++ v ++ 
  MDP0000244873  96 qvtdveplsklrnxsrnnvQXKEQGEKK-PRTKRARVRASPVEQLP 140
                    5666788888887776644444444444.44444444444444444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048737.8E-10138No hitNo description
SuperFamilySSF1167688.5E-12142IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene3DG3DSA:1.10.3180.101.6E-15146IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    Send to blast
MSPDIAKIRK HVRQSKCLQD KMTAKESAIW LGVLSREESL IRQSSSDNGT SGIIEMPQSG  60
RGEKQAAASS NSDYDVDGTD DGLGSVSSSK DDMRNQVTDV EPLSKLRNXS RNNVQXKEQG  120
EKKPRTKRAR VRASPVEQLP APSPNEHLHV RGALPDINHT DVQMIGFQVH ENQQENGGIT  180
TLRPLENDLD VQAQIPAPEF NYYPGVPSEN VIMTQGMHVG GTPLLYHGVQ DADMHHGDTF  240
NQHHGDTFNL XNPXAQYPPS QDQQLPQIVM NKPQXIPXXG IHVPVHRNGS EIAGXDXNFV  300
QDTFQSEQDR TANANFGSPI DSLSLDYGLF NSPFNFGIDS TGSLDDLELE EMMEYFAA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wij_A5e-1814992140ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.1890.0root
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008366164.20.0LOW QUALITY PROTEIN: ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBLA0A498KBW10.0A0A498KBW1_MALDO; Uncharacterized protein
STRINGXP_008349446.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF32234200
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73730.14e-40ETHYLENE-INSENSITIVE3-like 3