PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MDP0000236327

Organism

Malus domestica

Taxonomic ID

3750

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus

Family

NZZ/SPL

Protein Properties

Length: 533aa MW: 58333.9 Da PI: 8.1752

Description

NZZ/SPL family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MDP0000236327	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NOZZLE	21.8	3.2e-07	158	232	1	80
NOZZLE 1 matslffmstdqnsvrnpnellrntrlvvnssgeirte.tkksrgrkpgsktaqqkqkkptlrgmgvaklerfiieeekkk 80 mat +++m++++n+ ++p + l ++ e ++e +k ++ k s a + kk rg+gva+ler ++++ kk MDP0000236327 158 MATPMLLMASERNTTKQPAKTLFGSYD------ESKSEpAKPTKTTKKSSTKASSNTKKQPQRGLGVAQLERLRLQDWKKM 232 89**************998876665......55555233345555555556666666667***********999885 PP

Sequence ? help Back to Top
Protein Sequence Length: 533 aa Download sequence Send to blast
MESESHLPTW KFVIGEKLTR LHGGLGRRGG SYILLLHTHG MDTCRLITQL GLLTKQTQWM 60 ANAGITCLIC VTKAVWCSKI VHGNEEIMLQ IGQSSNPTLP RVSRYYVVLA LPPPVLWERA 120 LQLDLALERD MHLSEVWVGF CKVQTLSGIC VLSGVGNMAT PMLLMASERN TTKQPAKTLF 180 GSYDESKSEP AKPTKTTKKS STKASSNTKK QPQRGLGVAQ LERLRLQDWK KMTEVPQLQP 240 QPQVLNLPPL PHHHHHQYQN PITLPDPLNS VPVQYGASRF NGPSVMNGCG GSAATTTCFY 300 GLVGQRVGNG SGFGYAGXNN LVTNLDPRPY GVWAPDPRVQ SGAVYETSRE LSSMPKIQSL 360 SSDCCDHCFK GLQKKRFNSG DYMALNGRSD KSATVSPING SVFLGLNPET GSFGDRVGSR 420 AAGYLGRSNL VDDQGVGVRA VHRKGGSAGG GIFMEYEFFP AADYQKSDEI KRGCTYPKLQ 480 TVGREEEEEE EEEEASDITA AATFNGYGIG AADSYHDHQH HHHPVDLSLK LSF

Sequence ? help Back to Top

Protein Sequence Length: 533 aa Download sequence Send to blast

MESESHLPTW KFVIGEKLTR LHGGLGRRGG SYILLLHTHG MDTCRLITQL GLLTKQTQWM  60
ANAGITCLIC VTKAVWCSKI VHGNEEIMLQ IGQSSNPTLP RVSRYYVVLA LPPPVLWERA  120
LQLDLALERD MHLSEVWVGF CKVQTLSGIC VLSGVGNMAT PMLLMASERN TTKQPAKTLF  180
GSYDESKSEP AKPTKTTKKS STKASSNTKK QPQRGLGVAQ LERLRLQDWK KMTEVPQLQP  240
QPQVLNLPPL PHHHHHQYQN PITLPDPLNS VPVQYGASRF NGPSVMNGCG GSAATTTCFY  300
GLVGQRVGNG SGFGYAGXNN LVTNLDPRPY GVWAPDPRVQ SGAVYETSRE LSSMPKIQSL  360
SSDCCDHCFK GLQKKRFNSG DYMALNGRSD KSATVSPING SVFLGLNPET GSFGDRVGSR  420
AAGYLGRSNL VDDQGVGVRA VHRKGGSAGG GIFMEYEFFP AADYQKSDEI KRGCTYPKLQ  480
TVGREEEEEE EEEEASDITA AATFNGYGIG AADSYHDHQH HHHPVDLSLK LSF

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_028956361.1	0.0	uncharacterized protein LOC114824134
TrEMBL	A0A498KCW6	0.0	A0A498KCW6_MALDO; Uncharacterized protein
STRING	XP_009377333.1	0.0	(Pyrus x bretschneideri)
STRING	XP_009377340.1	0.0	(Pyrus x bretschneideri)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF8365	17	23

Link Out ? help Back to Top
Phytozome	MDP0000236327