PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000234120
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family G2-like
Protein Properties Length: 425aa    MW: 47536.4 Da    PI: 9.5126
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000234120genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like95.34.8e-30167221255
        G2-like   2 prlrWtpeLHerFveaveqLGGse.kAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                    prlrWtpeLH++F++a+e+LGG++ +AtPk +l+lm+vkgLt++hvkSHLQ+YR+
  MDP0000234120 167 PRLRWTPELHRCFLQAIERLGGHKtEATPKLVLQLMDVKGLTISHVKSHLQMYRS 221
                    8*********************9747****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.608.3E-30163222IPR009057Homeodomain-like
PROSITE profilePS512949.966163224IPR017930Myb domain
SuperFamilySSF466892.33E-15165221IPR009057Homeodomain-like
TIGRFAMsTIGR015573.0E-22167221IPR006447Myb domain, plants
PfamPF002499.5E-9168220IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 425 aa     Download sequence    Send to blast
MITRYKRNGY VESFSKHAKF VIELGLGEHG HPEEKFFART NHPSALPALA KYSIQHNNSS  60
PTPNQELEIM REKEKGQGEA VVASSLLVWY RGKELERRRW VQGRCTRDKQ KAQAAGGERE  120
RGKYRIVKST FIKGSGEDPG WWEKKMTTSS CSARNGAVRQ YVRSKVPRLR WTPELHRCFL  180
QAIERLGGHK TEATPKLVLQ LMDVKGLTIS HVKSHLQMYR SMRGDPIIRQ DRVQTRKLHS  240
FEEAEDDGCV EEVNGLSFYP SSKPTRESDS QVICNPRRSK RARTETMGSN ISEGLQQQQC  300
SKGGIYETVS NPYSFDDYVL ALGIKENPHP SAFKIALQES DFLKVATLPE AGGAHVEDHH  360
EAGQCELSLS LSLHQPSSHK SNASSSDFSG AISSSYSRPN SKDCSASSSG NRNLNLNLSI  420
ALCGN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A5e-16168223458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B5e-16168223458Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A5e-16168223357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B5e-16168223357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C5e-16168223357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D5e-16168223357Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A5e-16168223458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C5e-16168223458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D5e-16168223458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F5e-16168223458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H5e-16168223458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J5e-16168223458Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.302190.0bud| leaf
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018501963.10.0PREDICTED: putative Myb family transcription factor At1g14600
TrEMBLA0A498HI580.0A0A498HI58_MALDO; Uncharacterized protein
STRINGXP_008340524.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55393353
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40260.12e-29G2-like family protein