PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000233714
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family BES1
Protein Properties Length: 400aa    MW: 43365.6 Da    PI: 9.2739
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000233714genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822220.34.2e-68892301146
         DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqs 96 
                    g+sgr ptwkErEnnkrRERrRRaiaakiy+GLRaqG yklpk++DnneVlkALc+eAGwvve+DGttyrkg+kp   +e+ag+ +++s +ss+q+
  MDP0000233714  89 GSSGRLPTWKERENNKRRERRRRAIAAKIYSGLRAQGSYKLPKHCDNNEVLKALCAEAGWVVEEDGTTYRKGCKPS-PMEIAGTPTNMSACSSIQQ 183
                    689************************************************************************9.******************* PP

         DUF822  97 slkssalaspvesysaspksssfpspssldsislasaasllpvlsvlslv 146
                    s++ssa++spv+sy+asp+sssfpsp++++ ++++    llp+l + +++
  MDP0000233714 184 SPQSSAFPSPVPSYHASPSSSSFPSPTRFEGNPSS---YLLPFLCNIASI 230
                    *****************************999885...778877776655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056873.2E-6390213IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 400 aa     Download sequence    Send to blast
MEGGGVTTPA DALHTFQESR ETRLENMSTF LVRQPQKYCF PLLFPPLPTA ARHTPPSLSI  60
SHEKTESRER KLRKEGGGRP GKAKMTGGGS SGRLPTWKER ENNKRRERRR RAIAAKIYSG  120
LRAQGSYKLP KHCDNNEVLK ALCAEAGWVV EEDGTTYRKG CKPSPMEIAG TPTNMSACSS  180
IQQSPQSSAF PSPVPSYHAS PSSSSFPSPT RFEGNPSSYL LPFLCNIASI PTNLPPLRIS  240
NSAPVTPPLS SPTSRGSKRK PDWDSLTNGC INSLRHPLFA ASAPSSPTRR HHLTPATIPE  300
CDESDASTVD SGRWVSFQTG APAVAPPSPT FNLMKPVAEQ NVLQNAVEAH VGMGWGSTAE  360
RGRGSEFEFE SGTVKAWEGE RIHEVGADDL ELTLGNGKNH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A6e-3093171372450Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B6e-3093171372450Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C6e-3093171372450Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D6e-3093171372450Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.121300.0bud| cell culture| fruit| leaf| stem
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009349751.10.0PREDICTED: BES1/BZR1 homolog protein 2-like
SwissprotQ94A431e-116BEH2_ARATH; BES1/BZR1 homolog protein 2
TrEMBLA0A498KG250.0A0A498KG25_MALDO; Uncharacterized protein
STRINGXP_008338783.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF127534105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75080.22e-91BES1 family protein