PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000232923
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family G2-like
Protein Properties Length: 323aa    MW: 35154.3 Da    PI: 8.4495
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000232923genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like105.43.3e-3347101155
        G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                    k+rlrWt++LH+rFv+a++qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl
  MDP0000232923  47 KQRLRWTSDLHDRFVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRL 101
                    79****************************************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129411.88444104IPR017930Myb domain
Gene3DG3DSA:1.10.10.605.0E-3245102IPR009057Homeodomain-like
SuperFamilySSF466894.48E-1746101IPR009057Homeodomain-like
TIGRFAMsTIGR015575.7E-2647102IPR006447Myb domain, plants
PfamPF002491.8E-749100IPR001005SANT/Myb domain
PfamPF143798.6E-10133158IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
PfamPF143794.2E-10188212IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    Send to blast
MYHAKKFSTA SLVPHKPQSS QELANVGVVS GGSSVKSPTP SGGGSGKQRL RWTSDLHDRF  60
VDAITQLGGP DRATPKGVLR VMGVPGLTIY HVKSHLQKYR LAKYLPESPA DGSKDEKKGS  120
GDSLSCSDSS PGVQINEALR MQMEVQKRLH EQLELIQQLH SLEVKVFVXH FSSPGPEFGS  180
GFGNMDWVQR QLQMRIEAQG KYLQKIIEEQ QKFGGSLKAS EALPSAEEKQ KPAHLETMGD  240
ASAAPSSPRK KQRVDEGLAD GCATSNLPLK ADQKNEFVGQ WDREVYGSDG GYGFGLQTEF  300
KERDGGAAQK APMELDPLCG SKQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A9e-2346104159Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B9e-2346104159Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A9e-2346104159Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C9e-2346104159Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D9e-2346104159Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F9e-2346104159Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H9e-2346104159Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J9e-2346104159Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.123380.0bud| cell culture| fruit| leaf| root| stem
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFR8285521e-124FR828552.1 Rosa hybrid cultivar mRNA for putative MYB transcription factor (myb1 gene), cultivar Yellow Island.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009345372.10.0PREDICTED: myb family transcription factor PHL7-like
RefseqXP_009347649.10.0PREDICTED: myb family transcription factor PHL7-like
RefseqXP_009347650.10.0PREDICTED: myb family transcription factor PHL7-like
SwissprotQ9SJW03e-66PHL7_ARATH; Myb family transcription factor PHL7
TrEMBLA0A498IFZ30.0A0A498IFZ3_MALDO; Uncharacterized protein
STRINGXP_009345372.10.0(Pyrus x bretschneideri)
STRINGXP_009347649.10.0(Pyrus x bretschneideri)
STRINGXP_009347650.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF130132330
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.12e-56G2-like family protein