PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000231843
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family NAC
Protein Properties Length: 474aa    MW: 53153.3 Da    PI: 5.5365
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000231843genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM89.46.5e-28181361120
            NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                    lp+G+rFhPt+eel+++yLk k++gk+  ++++i+e++i+++eP++Lp  ++ ++++ewyf+ +   k++  ++ +rat++g+Wk+tgk+k   + 
  MDP0000231843  18 LPVGYRFHPTEEELISHYLKLKLRGKDSLVSDAIREINICNYEPRELPeISLIKSDDEWYFYNRPIYKKNXRNEVERATATGFWKSTGKEKXKSRL 113
                    799************************99999****************545556789********************************9887763 PP

            NAM  96 kgelvglkktLvfykgrapkgektd 120
                    ++  + l + +v+   ++++g++td
  MDP0000231843 114 ET--TKLSRDFVLCYVKKKSGKNTD 136
                    44..444444444445777777775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.44E-269133IPR003441NAC domain
PROSITE profilePS5100525.39418167IPR003441NAC domain
PfamPF023652.0E-1319118IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 474 aa     Download sequence    Send to blast
MASNGIRFTR VEVEGLLLPV GYRFHPTEEE LISHYLKLKL RGKDSLVSDA IREINICNYE  60
PRELPEISLI KSDDEWYFYN RPIYKKNXRN EVERATATGF WKSTGKEKXK SRLETTKLSR  120
DFVLCYVKKK SGKNTDVATG DEGESSNYNN AHDFENQLQP AHNMHVEEER TQPPPNPDIF  180
QRELDSMLGH TRGNNDYHGT QSAPGANESD GDSEEFVNTV IVDPYEAFSE QITHANVLNN  240
STLPQSPRKV YLKDCGVSSG SATEVQHAVD EEGQSXGGKG VPLRNRILIQ AASSTNVLPK  300
PQTDRLQSVS DEDSGASRPI KKSASSVDVD ADSLLINSIQ LASDEYYNNE RTRRRTYXTS  360
ALLAXGKPNE LEQQQSKAKV AAERRAAVDF PPKRNFITES NKDXEXVQGN NTEKGLKQTH  420
NATTAGNWMS CSXISXETXP PLTXPPSVYL FNTVLGAILF FVFAWEVVLY GQWC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A5e-1451362132Stress-induced transcription factor NAC1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028961613.10.0NAC domain-containing protein 69-like isoform X3
TrEMBLA0A498JJR80.0A0A498JJR8_MALDO; Uncharacterized protein
STRINGXP_008356979.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF13478522
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01550.13e-24NAC domain containing protein 69