PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000226115
Common NameAP2D2, ERF2
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family ERF
Protein Properties Length: 334aa    MW: 37275.1 Da    PI: 4.8847
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000226115genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.66.4e-18191241255
            AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                    +y+GVr+ + +g+++AeIrdp +ng  +r++lg++ t eeAa a+++a+ +++g
  MDP0000226115 191 HYRGVRQXP-WGKFAAEIRDPAKNG--ARVWLGTYETSEEAALAYDRAAFRIRG 241
                    7********.***********9987..*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.105.1E-30190250IPR001471AP2/ERF domain
CDDcd000181.33E-31191250No hitNo description
PfamPF008471.6E-13191241IPR001471AP2/ERF domain
SuperFamilySSF541713.4E-22191251IPR016177DNA-binding domain
PROSITE profilePS5103223.644191249IPR001471AP2/ERF domain
SMARTSM003801.0E-35191255IPR001471AP2/ERF domain
PRINTSPR003671.6E-9192203IPR001471AP2/ERF domain
PRINTSPR003671.6E-9215231IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    Send to blast
MEEQAQHYTS CCSATMSNIS SPHVMPCLTE QWGNLPFQVD DSEDMIVYNS LRDAFSLGWS  60
PDHTFPFQVD DWEDMINNNS DALSLGWSPD HTLECIKXEQ AYDLDHLFDQ YHDQLPPDLF  120
TQSQPHDFDV SINGNKPSQX LVLPPDTDIP PLDHDDRDQN QVQVGDAVAE QEELNVNVPK  180
LQKSGVARGR HYRGVRQXPW GKFAAEIRDP AKNGARVWLG TYETSEEAAL AYDRAAFRIR  240
GSKALLNFPH RIGLNEPPPV RVTGKRKEPX QEAAASSSTS SSSSATPTAA TKRSKLDKSV  300
SSSADHDHQA NVCHTRQKNN TSYMLAIGEQ LLVS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A6e-37187256170ATERF1
3gcc_A6e-37187256170ATERF1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.72100.0fruit| leaf
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB2883480.0AB288348.1 Malus x domestica MdERF2 mRNA for ethylene response factor, complete cds.
GenBankKC1288570.0KC128857.1 Malus x domestica cultivar Taishanzaoxia ethylene response factor (ERF2) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001280848.10.0ethylene-responsive transcription factor 2-like
TrEMBLD9ZIM10.0D9ZIM1_MALDO; AP2D domain class transcription factor
STRINGXP_008375701.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1691658
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47220.14e-40ethylene responsive element binding factor 2
Publications ? help Back to Top
  1. Li M, et al.
    Hypersensitive ethylene signaling and ZMdPG1 expression lead to fruit softening and dehiscence.
    PLoS ONE, 2013. 8(3): p. e58745
    [PMID:23527016]