PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MDP0000222377

Organism

Malus domestica

Taxonomic ID

3750

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus

Family

G2-like

Protein Properties

Length: 349aa MW: 39076 Da PI: 4.4835

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MDP0000222377	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	56	9e-18	314	348	17	51
G2-like 17 aveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 a++qLGGs+ AtPk+i+elmkv+gLt+++vkSHLQ MDP0000222377 314 ALQQLGGSHAATPKQIRELMKVDGLTNDEVKSHLQ 348 89********************************* PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF102198	2.88E-7	238	287	No hit	No description
Gene3D	G3DSA:3.50.30.50	5.1E-8	239	287	No hit	No description
Gene3D	G3DSA:1.10.10.60	1.2E-12	314	348	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	3.9E-14	314	349	IPR006447	Myb domain, plants

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence Send to blast
MEDECPTKNL EFLVESCAGG GGHHGKIILS SVVSLTSTFW EATLPSPSIP WPFPDSSRPP 60 TQWCPPNDPY IKLNVDASWN RADEAMTVLR GSGKFNLGKN FKYGNFFLGL LLVLDSKIGQ 120 PDGRPFGVEE EHEDVQQNLV ANLKRFCLSK EVEIGYTAAT CGVVVEQLLD KNPYNSDIFS 180 DLENYVNEQV CFFTNRNLGL MPISAFFASI RVENYNFENK FANWLPVASR GHEIMADYVQ 240 EYSSYVGFMR DGAQWFVENT DIKLVGIDYL SAAAYDDLIP SHLVFLEGRE NDDPLQGEIA 300 WNRTPRELGI SAYALQQLGG SHAATPKQIR ELMKVDGLTN DEVKSHLQV

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence Send to blast

MEDECPTKNL EFLVESCAGG GGHHGKIILS SVVSLTSTFW EATLPSPSIP WPFPDSSRPP  60
TQWCPPNDPY IKLNVDASWN RADEAMTVLR GSGKFNLGKN FKYGNFFLGL LLVLDSKIGQ  120
PDGRPFGVEE EHEDVQQNLV ANLKRFCLSK EVEIGYTAAT CGVVVEQLLD KNPYNSDIFS  180
DLENYVNEQV CFFTNRNLGL MPISAFFASI RVENYNFENK FANWLPVASR GHEIMADYVQ  240
EYSSYVGFMR DGAQWFVENT DIKLVGIDYL SAAAYDDLIP SHLVFLEGRE NDDPLQGEIA  300
WNRTPRELGI SAYALQQLGG SHAATPKQIR ELMKVDGLTN DEVKSHLQV

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Mdo.1805	7e-69	bud\| cell culture\| fruit

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25550.1	3e-15	G2-like family protein

Link Out ? help Back to Top
Phytozome	MDP0000222377