PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000219269
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family EIL
Protein Properties Length: 434aa    MW: 49040.7 Da    PI: 5.7905
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000219269genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3382.75.4e-117303241286
                    XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
           EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWk 96 
                    +elkkr wkd ++l++l+e++k    +++++ + ++s+  +e + rkkm+raQD+iLkYM+k+mevc+a+GfvYgi+pekgkpv+g+sdsLr+WWk
  MDP0000219269  30 DELKKRTWKDSIRLQKLNENRKIIEXEEDEEEELAESSANQEXSHRKKMARAQDSILKYMVKIMEVCKAKGFVYGIVPEKGKPVTGSSDSLREWWK 125
                    79*****************9998555555558888999********************************************************** PP

                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--. CS
           EIN3  97 ekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqgt 192
                    +k +fd n+p+ai+ y    li++ges+      s+ h l+elqDTtlgSLLsal+qhc ppqrrfplekg++pPWWPtGke wwg +gls ++g+
  MDP0000219269 126 DKARFDHNAPIAIAXY-LPALIFEGESDH----GSYAHLLHELQDTTLGSLLSALIQHCVPPQRRFPLEKGLAPPWWPTGKEMWWGDQGLSVEHGA 216
                    ****************.678999988877....89************************************************************* PP

                    -----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX...XXXXXXXXXXXXXXXXXXXXXX CS
           EIN3 193 ppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah...ssslrkqspkvtlsceqkedve 285
                    ppy+kphdlkkawkvs L+av+khm+p+++++r+l+ qsk+lq km+ake++++++v+nqee++++        s +++k  ++++    ++++++
  MDP0000219269 217 PPYRKPHDLKKAWKVSALAAVVKHMAPNSDRVRRLVTQSKCLQXKMTAKETAIWSKVVNQEESLIQLTEKClkiSDHSNKXGKNLKWPATTSNEKR 312
                    **************************************************************9885443333333344444444444333333333 PP

                    ...........X CS
           EIN3 286 ...........g 286
                               +
  MDP0000219269 313 kmisidlglgfV 324
                    234444444433 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048732.6E-11530278No hitNo description
Gene3DG3DSA:1.10.3180.101.7E-65153283IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167681.44E-57157281IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0080167Biological Processresponse to karrikin
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 434 aa     Download sequence    Send to blast
MVKFHGQVDP LSLGVVAEDE KAAEDHISYD ELKKRTWKDS IRLQKLNENR KIIEXEEDEE  60
EELAESSANQ EXSHRKKMAR AQDSILKYMV KIMEVCKAKG FVYGIVPEKG KPVTGSSDSL  120
REWWKDKARF DHNAPIAIAX YLPALIFEGE SDHGSYAHLL HELQDTTLGS LLSALIQHCV  180
PPQRRFPLEK GLAPPWWPTG KEMWWGDQGL SVEHGAPPYR KPHDLKKAWK VSALAAVVKH  240
MAPNSDRVRR LVTQSKCLQX KMTAKETAIW SKVVNQEESL IQLTEKCLKI SDHSNKXGKN  300
LKWPATTSNE KRKMISIDLG LGFVEKKSRA DYDQGQDQDR TLCASDQNSG AVSVVDWINM  360
EIEKANRIDD NSGTKVADGY GSASYWGGGI DDDDLAMDXA LEIQRGNMDL NRSSEDMSHN  420
YDQDSTSIWD LGYD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A9e-581552801126Protein ETHYLENE INSENSITIVE 3
4zds_B9e-581552801126Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008361490.20.0putative ETHYLENE INSENSITIVE 3-like 4 protein
SwissprotQ9LX161e-118EIL4_ARATH; Putative ETHYLENE INSENSITIVE 3-like 4 protein
TrEMBLA0A498KMG60.0A0A498KMG6_MALDO; Uncharacterized protein
STRINGXP_009378550.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF32234200
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10120.11e-113EIL family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Jeong HJ,Choi JY,Shin HY,Bae JM,Shin JS
    Seed-specific expression of seven Arabidopsis promoters.
    Gene, 2014. 553(1): p. 17-23
    [PMID:25261846]