PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000218271
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family BES1
Protein Properties Length: 488aa    MW: 54387.8 Da    PI: 9.2786
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000218271genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822178.92.4e-5521581149
         DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyr..............kgskpleeaeaa 82 
                    ++++r pt kErEnnkrRERrRRaiaaki+aGLR++Gnyklpk++DnneVlkALc eAGw+ve DGttyr               g+kp e++e++
  MDP0000218271   2 TSGTRLPTSKERENNKRRERRRRAIAAKIFAGLRMYGNYKLPKHCDNNEVLKALCDEAGWTVELDGTTYRkknsikigkferqlSGCKPVERMEVM 97 
                    5899******************************************************************76666666666666666777777777 PP

         DUF822  83 gssasaspesslqsslkssalaspvesysaspksssfpspssldsislasa..asllpvlsvlslvsss 149
                      s+ asp+ss +        +s ++sy++sp sssfpsp+s++   +++a   sl+p+l++ls++sss
  MDP0000218271  98 XGSTVASPSSSFH--------PSNCASYNPSPGSSSFPSPTSSSYXANQNAdsRSLIPWLRNLSSASSS 158
                    7777777777766........9******************988776655555599********998776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056873.3E-574153IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 488 aa     Download sequence    Send to blast
MTSGTRLPTS KERENNKRRE RRRRAIAAKI FAGLRMYGNY KLPKHCDNNE VLKALCDEAG  60
WTVELDGTTY RKKNSIKIGK FERQLSGCKP VERMEVMXGS TVASPSSSFH PSNCASYNPS  120
PGSSSFPSPT SSSYXANQNA DSRSLIPWLR NLSSASSSAF SSKLPNLYIH SGSISAPVTP  180
PLSSPTARTP RMRTDWDDQS ARPGWAAQKY PFLPSSTPPS PGRQIVPDPE WFAGIPIPHG  240
PTSPTFSLVS SNPFGFKDEV SAGGGSRMWT PGQSGTCSPA IAAGSDHAAD IPMSEVISDE  300
FAFGCNTTGL VKAWEGEKIH EDSGSDDLEL TLGSSRTSPX GHCLLEXKFD WKESIYMYEL  360
AAAAAACVLK GXITPYMYEE FVVITXKXNI PFIRCGPNHY YCSILRLKTY WNDHKRYVAL  420
TAFLLCTWDA LSISTXHRRS FFKXNVCRIE NLXALNLHIF TXFDQKKSWR THDFSLTNKE  480
KRLRTRYF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A2e-172591391443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B2e-172591391443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C2e-172591391443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D2e-172591391443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
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Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.216961e-113bud| leaf| stem
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008381083.20.0BES1/BZR1 homolog protein 4
SwissprotQ9ZV881e-125BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLA0A498K6A60.0A0A498K6A6_MALDO; Uncharacterized protein
STRINGXP_008381083.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF26613375
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-113BES1/BZR1 homolog 4