PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000218209
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family ERF
Protein Properties Length: 550aa    MW: 60933.4 Da    PI: 4.4585
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000218209genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP223.21.7e-0791133752
            AP2   7 rwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkk 52 
                    r+ + +++W A++      g ++   +lg+f t+e+Aa+a++  + +
  MDP0000218209  91 RRISGKKKWQARLGR----GkRHNGLYLGTFETEEQAARAYDIGAIR 133
                    67777899****666....54459******************87766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003800.00132073IPR001471AP2/ERF domain
PROSITE profilePS510328.5184067IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.4E-74068IPR001471AP2/ERF domain
SuperFamilySSF541713.66E-64068IPR016177DNA-binding domain
PROSITE profilePS5103214.14486144IPR001471AP2/ERF domain
SMARTSM003807.8E-1191150IPR001471AP2/ERF domain
CDDcd000183.32E-1491146No hitNo description
SuperFamilySSF541712.35E-1095145IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.109.9E-1396145IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 550 aa     Download sequence    Send to blast
MAKKLDVIWE SGHQENYLHQ IRHGERQLTC DCEENNKCGF DKEEDAARAH DLAALKLWGE  60
CAKLNFPXEX YKKDLEEMQT MTKQDYFLXI RRISGKKKWQ ARLGRGKRHN GLYLGTFETE  120
EQAARAYDIG AIRTKGTDAA TNFDQTTLQT LPIYPNDSNC SQYVDPFLQD FQNTDNIQNN  180
QLLQYYSVSP RXQVQXVPAG YQNANFETNR IFSHWDGNTY GGGNNSVGSA INIGPVIPSQ  240
NHELNQFQYY NNDAYGQKLS QNPNSSYLLQ NSHVSAYPQT ISPTFLPGLN NLHTCSSYIG  300
ECSSSQAEVS LDTILGETDE SLGSDIVSEV VPVADLEVHV NPIERNSISV LPEDRENGST  360
GYQNANFETN PIFSHXDGNT DGRGDNSVGS AINIGPVIPS QNHELNXFQY YNNDAYGQKL  420
SQNPNSSYLL QNSHXSAYPQ TINSTFLPGL NNLHAISSYT GECSSSQAEM SLDTILGETD  480
GSLGSDMVSE VAPVADLEVH VNPIERNSVL PGDRENGSVV EVSGVSKSGH VLDTSSWKDL  540
LLMSLNDPDX
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A498I3Y90.0A0A498I3Y9_MALDO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1650648
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51190.18e-31AP2 family protein