PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000206868
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family NAC
Protein Properties Length: 335aa    MW: 37565.2 Da    PI: 4.551
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000206868genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM60.94.1e-1981222109
            NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                    p+G++ hP+deelv +yL +kv+g++++ e+vi+e+d y ++e +d+ +    +  ++++++yfF+k + ++ tg+r  r++ sg+Wk      +v
  MDP0000206868   8 PVGYKCHPRDEELVGYYLYNKVRGTPFRDENVIPEIDPYgSMEARDIWNnngeQNLEKDEDLYFFTKLKPAKGTGSRVARTIGSGTWKGETAGAKV 103
                    89**************************999*****98835699999632343333367799**************************99999999 PP

            NAM  93 lsk.kgelvg.lkktLvfy 109
                    ++  ++e++g  k  +++y
  MDP0000206868 104 KDPkTKETIGfFKSHITYY 122
                    9875444444267788888 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019419.55E-195126IPR003441NAC domain
PROSITE profilePS5100519.2187155IPR003441NAC domain
PfamPF023658.9E-128125IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    Send to blast
MAHSDTFPVG YKCHPRDEEL VGYYLYNKVR GTPFRDENVI PEIDPYGSME ARDIWNNNGE  60
QNLEKDEDLY FFTKLKPAKG TGSRVARTIG SGTWKGETAG AKVKDPKTKE TIGFFKSHIT  120
YYCDSEVINQ YDIPQQQEHA TATSDPLNVT NLPTRLAEQQ HYFVTQDPTV ASSSLAMAGP  180
DNQEQQVQSN VTDLPQYYYD GDARYLHPAM ASSLGMSISS QEGYLQHNGL VSNVMTDLTQ  240
YYYSSTQDPS SGIVSSQYDP PQTATTGFAN QPHYFVTQDH QPHYVVANAT VASSLASPSN  300
LDHNHRIMDK DQLPPLTFDY TPGDIMIDLD DLWNN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028945244.10.0NAC domain-containing protein 68-like
TrEMBLA0A498ILP10.0A0A498ILP1_MALDO; Uncharacterized protein
STRINGXP_008385689.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55724133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17980.11e-12NAC domain containing protein 71