PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000197814
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family G2-like
Protein Properties Length: 309aa    MW: 34658.9 Da    PI: 10.3665
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000197814genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like79.34.6e-25173224253
        G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkY 53 
                    +r+ W+peLH rF++a++ LGG+++AtPk+i  +m+v+gLt ++vkSHLQ Y
  MDP0000197814 173 KRRSWSPELHXRFLKAMSLLGGPQEATPKQIQAVMQVDGLTHDQVKSHLQPY 224
                    799***********************************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129413.327169229IPR017930Myb domain
SuperFamilySSF466894.66E-13170224IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.1E-20171224IPR009057Homeodomain-like
TIGRFAMsTIGR015572.8E-21172224IPR006447Myb domain, plants
PfamPF002492.2E-6174225IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    Send to blast
MASSNRLELT LSLKLANIEN VSQKLSVLNE HLQKHQEELR KLEAFRTEMP HSVLLLSDAV  60
QVLKNEISEL SDHQSERRSA FRKYKSSSPP FNPKPXGIDT TDHKQVMTSQ CSQSSSRMGM  120
MVNKEPTSPT PFPCDLNMAA DDFELESKPQ AQPESQPQPQ LPXPLPLPNL KNKRRSWSPE  180
LHXRFLKAMS LLGGPQEATP KQIQAVMQVD GLTHDQVKSH LQPYLGDGAS NXRLRINTSH  240
KMKYRLNNRG VQPASXVSGQ RAPHFYRDYW QQQQQLEGAS NGGVRVGIGS SNGGGRSRDI  300
SNKKAKTSR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017179486.20.0transcription factor HHO6-like
TrEMBLA0A498HDE21e-157A0A498HDE2_MALDO; Uncharacterized protein
STRINGXP_009373817.11e-180(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF148661012
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03500.16e-20G2-like family protein