PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000189617
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family GeBP
Protein Properties Length: 845aa    MW: 94558.1 Da    PI: 5.732
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000189617genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57383.53e-26150246298
         DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveK....irrLKkKfkkkvkkaksgkepsfskehdqkifelsk 93 
                    + qrlwse+Dei++L+G+i+f++k+g+   +++ +f ef+ k ++++ s++qlveK    irrLKkK +      ++g++ +fsk+h+ k+++l k
  MDP0000189617 150 KGQRLWSEDDEITILKGIIEFESKKGVAXNSNVARFLEFITKDLQVDLSTDQLVEKltdkIRRLKKKHQA----GEDGEDSVFSKPHELKCLDLWK 241
                    569*************************************************987511116777777655....4467****************** PP

         DUF573  94 kiWgs 98 
                    kiWgs
  MDP0000189617 242 KIWGS 246
                    ***95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045043.2E-23152245IPR007592Protein of unknown function DUF573
PfamPF142231.5E-11774845No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 845 aa     Download sequence    Send to blast
MPXQFKTFSF SPMVPKKLVE DPPPAVVEDS DEETVDEEEE EEDDAVEAEV SKAKYVDLND  60
DELEEEDEEE EGRPSAATES DNNSPSASDF TVKPIVSKPA NDAVVPSKKT ASAKXAAAPN  120
SGSKRPAETE PNPKNSKKKK VGVDDEELKK GQRLWSEDDE ITILKGIIEF ESKKGVAXNS  180
NVARFLEFIT KDLQVDLSTD QLVEKLTDKI RRLKKKHQAG EDGEDSVFSK PHELKCLDLW  240
KKIWGSEGNG IDSNAKGGKR KPPRKNNKVN NDMVLALPVS EVTVKKEVQK NVGNGGVKAD  300
PDDFWSKYPC LNGSLRTGNC AQSSDLTRLV IEKMPSLIGS SKAKELEERW RALQLIEMDL  360
SVKKLDLMQE QTKLVLDLMK VLYFYVRIRL AIHPVDKNTG EEFVPVKREC CQGVIHLEEI  420
PYXLKNLVTD NLTNQISVNF FMVFKFDGXE SEGESKDKAL GFRXREMPTT LPRSILNLPT  480
KVRLPPQWSA RHITTDSLCV QCSHPYETTL HLLKDCPFAK CAWLLSPLGI PICDRNPPSP  540
LCWAMNAIDN LPSWGLKMFL MIYWSIWGAR NTKLWSGSCD SPDVSTARSI HCHPSSVHPP  600
PPHKWLAPPS SKLKLNVDDA WDVDRKLGGY GSVVRDDRGC FVAAKCGHFP NVCSPFLATA  660
MAFRALLVVE DIKTFLPSIT GALPTHARCQ SNGVAXRLAR QPLLSQDHAL FELCHIVSLS  720
LRYSDIENKS CYALELVLAS MAASSANSSD PQFSCVNYLN AIEKKFKESE KAEKIEGTGS  780
IRDHIMKMTD AMEKLNSMDV NIGEKQLVFM ILQALPNKYS QLKVSYNTQD KNWDIDELIA  840
QFVQE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF139661119
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00390.17e-20DNA-binding storekeeper protein-related transcriptional regulator