PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000169473
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family bZIP
Protein Properties Length: 286aa    MW: 31000.2 Da    PI: 9.2669
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000169473genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.83.2e-10210265452
                    XCHHHCHHHHHHHHHHHHHHHHH.......HHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   4 lkrerrkqkNReAArrsRqRKka.......eieeLeekvkeLeaeNkaLkkeleel 52 
                    ++r +r++kNR +A rsR+RK++       ++ eLe kv+ L +eN +Lk +le+l
  MDP0000169473 210 DRRHKRMIKNRDSAARSRARKQEcispvlaYTNELELKVAHLMEENARLKGQLEQL 265
                    6899*****************954444444999*****************777766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.4E-13204265No hitNo description
SMARTSM003381.2E-8207275IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.646209265IPR004827Basic-leucine zipper domain
CDDcd147071.42E-23211272No hitNo description
SuperFamilySSF579592.94E-8211265No hitNo description
PfamPF001702.6E-8211265IPR004827Basic-leucine zipper domain
PROSITE patternPS000360214229IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009911Biological Processpositive regulation of flower development
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:2000028Biological Processregulation of photoperiodism, flowering
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0043621Molecular Functionprotein self-association
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    Send to blast
MLSSTGSDQT NHNTTSTSSW SSSSSPSPFS QPSSFQTPQR TMEEVWKDFN LASLTDPTTQ  60
IRSSSSTSPL LQINLPNGPH QGHHHHPNFR NMTLQDFLAR PFAHDSPAAA AALVSAAASP  120
PSPLAPAAPT LLGLNNPGSE FQLFYASDSL RPPSSGFIDH HQANHNNISS SVSNSFSGCP  180
FESLAASSFG LPSFGKRSFT ESDNSNSGGD RRHKRMIKNR DSAARSRARK QECISPVLAY  240
TNELELKVAH LMEENARLKG QLEQLIAAAS QQPKRHNLHR TSTAPF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKU3194350.0KU319435.1 Eriobotrya deflexa FD2 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018504483.11e-139PREDICTED: protein FD-like
TrEMBLA0A498HZE00.0A0A498HZE0_MALDO; Uncharacterized protein
STRINGXP_009363456.11e-138(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF37553252
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35900.13e-30bZIP family protein