PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MDP0000164300 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
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Family | G2-like | ||||||||
Protein Properties | Length: 128aa MW: 14977.7 Da PI: 9.4381 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 41.9 | 2.3e-13 | 85 | 111 | 26 | 52 |
G2-like 26 kAtPktilelmkvkgLtlehvkSHLQk 52 AtPk+i+elmkv+g t+++vkSHLQk MDP0000164300 85 AATPKQIRELMKVDGFTNDEVKSHLQK 111 69************************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 2.5E-10 | 83 | 112 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 8.9E-11 | 85 | 112 | IPR006447 | Myb domain, plants |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 128 aa Download sequence Send to blast |
MQLPQTMSVA XLFTPKIXSF YEEFYGFKGV KFVKGIILSS FDIDSDGKRW IPXKISKXFF 60 WKCCTGRFVL ATLCFVLANP YKFRAATPKQ IRELMKVDGF TNDEVKSHLQ KLEVILHVIS 120 DEFFYTYM |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Mdo.25673 | 1e-37 | leaf |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A498JVW1 | 7e-40 | A0A498JVW1_MALDO; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF38006 | 2 | 2 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G03500.1 | 1e-11 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | MDP0000164300 |