PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MDP0000162617 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
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Family | EIL | ||||||||
Protein Properties | Length: 465aa MW: 52044.9 Da PI: 10.1918 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 371 | 2e-113 | 7 | 355 | 3 | 322 |
XXXXXXXXXXXXXXXXXXXXX..XXXXX.....XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 3 lkkrmwkdqmllkrlkerkkqlledkeaa....tgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraW 94 lk++ w + + r++ ++k l +d++ + +++++ ++ +rk+ + g LkYMlk mevc+a+GfvYgiipekgkpv+gasd++raW MDP0000162617 7 LKRKIW--RGECGRIELNSKGLKKDRNLKlnklLKSRSPSRXVRLGERKQEHKM--GFLKYMLKLMEVCKARGFVYGIIPEKGKPVSGASDNIRAW 98 789999..7788888888888777777764332333333333333346666666..**************************************** PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT- CS EIN3 95 WkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdq 190 Wkekv+fd+ngpaai+k++a++l++s+++++ ++ ++++ l++lqD+tlgSLLs+lmqhcdppqr++plekgv+pPWWPtG+e+ww +lgl++ q MDP0000162617 99 WKEKVKFDKNGPAAIAKHEAECLAMSDADNN--RNGNSQSILQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGVPPPWWPTGNEDWWVKLGLAHGQ 192 **************************99998..68999999****************************************************999 PP -.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX........XXXXXXXXXXXXX CS EIN3 191 gtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss........slrkqspkvtlsc 278 ppykkphdlkk+wkv+vLtavikhmsp+i++ir+++rqsk+lqdkm+akes+++l vl++ee+++++ s+++ ++ +++++ +s+ MDP0000162617 193 I-PPYKKPHDLKKMWKVGVLTAVIKHMSPDIAKIRRHVRQSKCLQDKMTAKESAIWLGVLSREESLIRQPSSDNGtsgitempQSGHGEKQGAASS 287 9.9**********************************************************************4445677776667799999**** PP XXXXXXXXXXXXX.X.XXXXXXXXX.......................XXXXXXXXXXXXXXXXXXXX CS EIN3 279 eqkedvegkkeskik.hvqavktta.......................gfpvvrkrkkkpsesakvss 322 ++++dv+g+++ + +++++++++ + + +rk+ +++ + v++ MDP0000162617 288 NSDYDVDGTDDGVGSvSSSKDDRRNqvmdvdpssnlhnnarnnvqdkeQGEKKPRRKRARVRASPVKQ 355 *******5555443312333333336788888888888776665544434444444444444444433 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 2.2E-110 | 7 | 255 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 2.6E-72 | 129 | 263 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 1.19E-62 | 136 | 259 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 465 aa Download sequence Send to blast |
MSVTKRLKRK IWRGECGRIE LNSKGLKKDR NLKLNKLLKS RSPSRXVRLG ERKQEHKMGF 60 LKYMLKLMEV CKARGFVYGI IPEKGKPVSG ASDNIRAWWK EKVKFDKNGP AAIAKHEAEC 120 LAMSDADNNR NGNSQSILQD LQDATLGSLL SSLMQHCDPP QRKYPLEKGV PPPWWPTGNE 180 DWWVKLGLAH GQIPPYKKPH DLKKMWKVGV LTAVIKHMSP DIAKIRRHVR QSKCLQDKMT 240 AKESAIWLGV LSREESLIRQ PSSDNGTSGI TEMPQSGHGE KQGAASSNSD YDVDGTDDGV 300 GSVSSSKDDR RNQVMDVDPS SNLHNNARNN VQDKEQGEKK PRRKRARVRA SPVKQRPAPS 360 HNEHLHVPTR GALPDINHTD VQMIGLQVHE NQQENGAITT LRPLENDLDV QAQRPAPEFN 420 YPGVPSGNVI TTQGMHVGGT PLLYHGVRDA DMHHGDTLTS IMEIH |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wij_A | 2e-76 | 135 | 266 | 9 | 140 | ETHYLENE-INSENSITIVE3-like 3 protein |
Search in ModeBase |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Mdo.189 | 0.0 | root |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | EF031065 | 0.0 | EF031065.1 Prunus persica EIL1 mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017191198.2 | 0.0 | ETHYLENE INSENSITIVE 3-like 3 protein | ||||
Refseq | XP_017191199.2 | 0.0 | ETHYLENE INSENSITIVE 3-like 3 protein | ||||
Refseq | XP_028943719.1 | 0.0 | ETHYLENE INSENSITIVE 3-like 3 protein | ||||
Refseq | XP_028943720.1 | 0.0 | ETHYLENE INSENSITIVE 3-like 3 protein | ||||
Swissprot | O23116 | 1e-152 | EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein | ||||
TrEMBL | A0A498IUZ9 | 0.0 | A0A498IUZ9_MALDO; Uncharacterized protein | ||||
STRING | XP_008358875.1 | 0.0 | (Malus domestica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF322 | 34 | 200 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G73730.1 | 1e-139 | ETHYLENE-INSENSITIVE3-like 3 |
Link Out ? help Back to Top | |
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Phytozome | MDP0000162617 |
Publications ? help Back to Top | |||
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