PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000158654
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family G2-like
Protein Properties Length: 423aa    MW: 47637 Da    PI: 8.8087
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000158654genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like93.12.3e-29107158253
        G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkY 53 
                     rlrWtp+LH rFv+ave+LGG+e+AtPk +l+lm+vkgL+++hvkSHLQ +
  MDP0000158654 107 SRLRWTPDLHLRFVHAVERLGGQERATPKLVLQLMNVKGLSIAHVKSHLQYF 158
                    69************************************************87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512949.754103162IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.6E-26103158IPR009057Homeodomain-like
SuperFamilySSF466891.38E-13104159IPR009057Homeodomain-like
TIGRFAMsTIGR015572.2E-20107158IPR006447Myb domain, plants
PfamPF002493.6E-8108156IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 423 aa     Download sequence    Send to blast
MVKEKYDEFK IWPSLAHQYH IIGKQNIKRL GMKSESTSME EVSKSSPSTS KKEYDHEDDE  60
GEEDEVDEDG LQLSNNGVSS SNSTIDENHE KKGASGSVRQ YVRSKTSRLR WTPDLHLRFV  120
HAVERLGGQE RATPKLVLQL MNVKGLSIAH VKSHLQYFST FSGFDSNHQM HRSKKMEDPN  180
QVLTDXAGFF MEGGDNQLYN LTQLSMLQSX KKWPSSGLRY GATDHSXWQG RHHHHQIYGP  240
YRSSRTTALL DHNTRNIELY GSVAERILGS NNNNIRTTSA NQLHTNLPSP NPGQITWRRH  300
QITRDESCQT VIHRPCQDHH SWSAAIRDHQ GQNMLKRMAF DXDNSDLDLN LSLKVPPKHG  360
HGFGKGLQCG GDNHQKLHMG CSLSLSLSSS SSSKLGVKKL EGTTGYGDSK HGKNMASTLD  420
LTL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A6e-16107160356Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B6e-16107160356Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A4e-16107160255Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B4e-16107160255Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C4e-16107160255Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D4e-16107160255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A6e-16107160356Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C6e-16107160356Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D6e-16107160356Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F6e-16107160356Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H6e-16107160356Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J6e-16107160356Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008362730.20.0uncharacterized protein LOC103426420 isoform X1
TrEMBLA0A498KMP10.0A0A498KMP1_MALDO; Uncharacterized protein
STRINGXP_008362730.10.0(Malus domestica)
STRINGXP_008374230.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF23783482
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.18e-40G2-like family protein