PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MDP0000148746 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
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Family | NAC | ||||||||
Protein Properties | Length: 169aa MW: 19471.8 Da PI: 4.4706 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 67.8 | 3e-21 | 25 | 152 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpkkvka...eekewyfFskrdkkyatgkrknr.atksgyWkatgkdke 91 +p GfrFhPtd+el++++L ++v +++ + + i e+d++ k+ Pw +++ + e++++yfF++ +++ r +r + + g+W+++ + k+ MDP0000148746 25 MPLGFRFHPTDQELISFFLYNRVLHRDYCE-NLIYEFDLFgKTPPWVVWENFGGpglEDQDLYFFCQLTARSQ--ARIKReIDAGGTWSESNS-KP 116 699************************777.88****9873678899865443344488999*****988765..58888456689**98766.67 PP NAM 92 vlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 v++ +++++g k+ L + k + + dW+++ey++ MDP0000148746 117 VKDLeNEKAIGKKRNLRYEK--EGCEHDGDWLLEEYSI 152 766548889********984..4444589*******85 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 8.63E-23 | 18 | 155 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 24.278 | 25 | 169 | IPR003441 | NAC domain |
Pfam | PF02365 | 9.1E-17 | 26 | 152 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 169 aa Download sequence Send to blast |
MEKEGYGGIV PLGFYENQLL GSNGMPLGFR FHPTDQELIS FFLYNRVLHR DYCENLIYEF 60 DLFGKTPPWV VWENFGGPGL EDQDLYFFCQ LTARSQARIK REIDAGGTWS ESNSKPVKDL 120 ENEKAIGKKR NLRYEKEGCE HDGDWLLEEY SILPSVFGCA DDSDHEIGK |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008385051.2 | 1e-123 | NAC domain-containing protein 41-like | ||||
TrEMBL | A0A498HU72 | 2e-98 | A0A498HU72_MALDO; Uncharacterized protein | ||||
TrEMBL | A0A498IRZ7 | 1e-97 | A0A498IRZ7_MALDO; Uncharacterized protein | ||||
STRING | XP_008385050.1 | 1e-123 | (Malus domestica) | ||||
STRING | XP_008385051.1 | 1e-123 | (Malus domestica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF12591 | 6 | 34 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G39820.1 | 1e-15 | NAC domain containing protein 94 |
Link Out ? help Back to Top | |
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Phytozome | MDP0000148746 |