PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MDP0000146645 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
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Family | BES1 | ||||||||
Protein Properties | Length: 162aa MW: 18455.3 Da PI: 4.6893 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 128.8 | 6.3e-40 | 80 | 155 | 1 | 76 |
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl 76 gg++r ++ +E+E++k+RER+RRai+a+i+aGLR++Gny+l++raD+n+V++AL+reAGwvv +DGtt++ s+++ MDP0000146645 80 GGARRCRPIEEKERTKLRERQRRAITARILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPSKSQKN 155 6899******************************************************************666655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 3.3E-35 | 82 | 155 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Sequence ? help Back to Top |
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Protein Sequence Length: 162 aa Download sequence Send to blast |
MASGLQKLIT SEEDDDEEME MDVKEEDDGD EEDDEDGEKH VDAAQMMVGV DGEMPTRSNN 60 NNRFQQHHQF QEQVGTPGGG GARRCRPIEE KERTKLRERQ RRAITARILA GLRRHGNYNL 120 RVRADINDVI AALAREAGWV VLPDGTTFPS KSQKNPKWES FY |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008338860.2 | 1e-102 | beta-amylase 7 isoform X1 | ||||
Swissprot | O80831 | 2e-51 | BAM7_ARATH; Beta-amylase 7 | ||||
TrEMBL | A0A498JEY7 | 1e-100 | A0A498JEY7_MALDO; Beta-amylase | ||||
STRING | XP_008338860.1 | 1e-102 | (Malus domestica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF19853 | 4 | 5 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45880.1 | 4e-47 | beta-amylase 7 |
Link Out ? help Back to Top | |
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Phytozome | MDP0000146645 |
Publications ? help Back to Top | |||
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