PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000144922
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family EIL
Protein Properties Length: 374aa    MW: 43022.4 Da    PI: 7.9568
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000144922genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3345.31.3e-105303361300
                    XXXXXXXXXXXXXXXXXXXXXXX..XXXXX....XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
           EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaa...tgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLra 93 
                    eelkkrmwkd++ l+ lke  k  +ed+e      + ++s   +e++rrkkm+r+QD+iLkYM+k+me+c+a+GfvYgi+pekgkp++g+s sLr+
  MDP0000144922  30 EELKKRMWKDRICLQNLKESGKI-IEDEEDRedeEEPAESLAKQEASRRKKMARSQDSILKYMVKIMEICKAKGFVYGIVPEKGKPMTGSSYSLRE 124
                    8*****************99885.5566555122444555599***************************************************** PP

                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT CS
           EIN3  94 WWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskd 189
                    WWk+kv+fd+n+p+ais++    li+++++ +     s+ h l+elqDTtlg LLsalmqhc+ppqrrfplekg++pPWWPtG+e wwg +gls +
  MDP0000144922 125 WWKDKVRFDQNAPIAISEH-LPALIFEQGELD---HGSYAHLLHELQDTTLGFLLSALMQHCMPPQRRFPLEKGLAPPWWPTGEEMWWGDQGLSVE 216
                    *****************99.678999977766...89*********************************************************** PP

                    --.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX.XX...XXXXXXXXXXXXXXXX CS
           EIN3 190 qgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah.ss...slrkqspkvtlsceqk 281
                    + +ppy     lkkaw v  L+avikhm+p+++++r+l+rqsk+lqdkm+ake+++l++v+nqee +++ +  +  +   +++k+ ++++    ++
  MDP0000144922 217 HVAPPY-----LKKAWNVNALAAVIKHMAPNSDKVRKLVRQSKCLQDKMTAKETAILSKVVNQEELLIQ-ITEKcLKifdHSNKKGRNMKWPATAS 306
                    **9999.....677**************************************************97664.33333333432233333333322222 PP

                    XXXX...........XXXXXX.XXXXXXXX CS
           EIN3 282 edve...........gkkeskikhvqavkt 300
                    +++            ++k+s+  h q ++ 
  MDP0000144922 307 NEKGklmstdlglgfVDKKSRADHDQDQDH 336
                    222224456677766666666565555554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048737.6E-10530276No hitNo description
Gene3DG3DSA:1.10.3180.101.5E-55157280IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167681.44E-50160279IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    Send to blast
MVEFHGEVDT VRVGVVVEDE EASEDHISYE ELKKRMWKDR ICLQNLKESG KIIEDEEDRE  60
DEEEPAESLA KQEASRRKKM ARSQDSILKY MVKIMEICKA KGFVYGIVPE KGKPMTGSSY  120
SLREWWKDKV RFDQNAPIAI SEHLPALIFE QGELDHGSYA HLLHELQDTT LGFLLSALMQ  180
HCMPPQRRFP LEKGLAPPWW PTGEEMWWGD QGLSVEHVAP PYLKKAWNVN ALAAVIKHMA  240
PNSDKVRKLV RQSKCLQDKM TAKETAILSK VVNQEELLIQ ITEKCLKIFD HSNKKGRNMK  300
WPATASNEKG KLMSTDLGLG FVDKKSRADH DQDQDHDLQV TKTFRLKKLY STNRAVSEIL  360
GPYARLQRRL LKSI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A9e-501582781126Protein ETHYLENE INSENSITIVE 3
4zds_B9e-501582781126Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028949287.10.0putative ETHYLENE INSENSITIVE 3-like 4 protein
SwissprotQ9LX161e-109EIL4_ARATH; Putative ETHYLENE INSENSITIVE 3-like 4 protein
TrEMBLA0A498KMG60.0A0A498KMG6_MALDO; Uncharacterized protein
STRINGXP_008361490.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF32234200
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10120.11e-110EIL family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Jeong HJ,Choi JY,Shin HY,Bae JM,Shin JS
    Seed-specific expression of seven Arabidopsis promoters.
    Gene, 2014. 553(1): p. 17-23
    [PMID:25261846]