PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MDP0000133476 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
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Family | ERF | ||||||||
Protein Properties | Length: 362aa MW: 39707.7 Da PI: 6.7986 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.4 | 4.9e-20 | 37 | 87 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 ++ GVr+++ +grWvAeI+d s +r r +lg+++t+eeAa+a+++a+++l+ge MDP0000133476 37 RFVGVRQRP-SGRWVAEIKDSS---QRVRLWLGTYDTPEEAARAYDEAARALRGE 87 589******.7*********43...36**************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 4.32E-31 | 37 | 94 | No hit | No description |
Gene3D | G3DSA:3.30.730.10 | 2.8E-28 | 37 | 94 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 5.8E-35 | 37 | 100 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 4.9E-15 | 37 | 87 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 20.534 | 37 | 94 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 7.85E-20 | 38 | 94 | IPR016177 | DNA-binding domain |
PRINTS | PR00367 | 4.0E-7 | 38 | 49 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 4.0E-7 | 60 | 76 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 362 aa Download sequence Send to blast |
MAEPEVLTKT TIATSTTTNN KNMLTKSPSN TKTALRRFVG VRQRPSGRWV AEIKDSSQRV 60 RLWLGTYDTP EEAARAYDEA ARALRGENAR TNFAPPGPAT NPNSSPLVSC ASSGGFVSGS 120 DGRHAGAGLS FSSFKAKLSK NLQSIMARSS DHNKSSKSRV SDHFTFASIF HFRKYQYQNT 180 VNPLTDMKNI EKVVQPSIIV PHNNGESSTT TEPSSWENSS ISDCSAEWAH GFQQVGVDSE 240 GSEIGEGSIM DQIMGWMDSP DNQIGRISLG DDSEEGSRSK RKYQYRNTVN PLIDNEEYRE 300 SASWCPIIME SVTSTSSWEN SSISDGSAEW PTGSGKQGWI LKGSEIGEEV QGFILKTKKN 360 SY |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 1e-13 | 37 | 93 | 14 | 71 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008391661.2 | 0.0 | ethylene-responsive transcription factor ERF027-like | ||||
TrEMBL | A0A498HPT6 | 0.0 | A0A498HPT6_MALDO; Uncharacterized protein | ||||
STRING | XP_008391661.1 | 0.0 | (Malus domestica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF8324 | 31 | 43 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G19790.1 | 3e-16 | related to AP2 11 |
Link Out ? help Back to Top | |
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Phytozome | MDP0000133476 |