PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MDP0000130716 | ||||||||
Common Name | WRKY11 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
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Family | WRKY | ||||||||
Protein Properties | Length: 330aa MW: 35990.4 Da PI: 10.1464 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 98.2 | 5.2e-31 | 259 | 316 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ +d ++++tYegeHnh+ MDP0000130716 259 DDYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERALDDAAMLVVTYEGEHNHS 316 99************************988****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF10533 | 2.8E-15 | 210 | 255 | IPR018872 | Zn-cluster domain |
Gene3D | G3DSA:2.20.25.80 | 4.9E-32 | 246 | 316 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 30.572 | 252 | 318 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 2.62E-26 | 255 | 316 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.8E-37 | 257 | 317 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.6E-26 | 259 | 315 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 330 aa Download sequence Send to blast |
MAVDFMGYRN TISSSSSFSA KLEENAVQEA ASGLESVEKL IRLLSQAQQN QHQGKYPSTA 60 MDMDCRAVAD VAVSKFKKVI SLLGRTRTGH ARFRRAPLTL SSGSSSQTQN QSQEILVKHV 120 PLPLESTKVY HATPIQQIPP PHHHHSTVLE STKDSSTTIN FSYPXTTSFI SSLTGDSDSK 180 QPMSSSSFQI TNLSQVSSAG KPPLSSASLK RKCSSENLGS GKCGAGSSGR CHCKKRKLRQ 240 KRIVRVPAIS LKLADIPPDD YSWRKYGQKP IKGSPHPRGY YKCSSVRGCP ARKHVERALD 300 DAAMLVVTYE GEHNHSLSVA ETSNLILESS |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 9e-22 | 245 | 317 | 2 | 73 | WRKY transcription factor 1 |
Search in ModeBase |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Mdo.13065 | 0.0 | bud| fruit| leaf| stem |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | TISSUE SPECIFICITY: In young, mature and senescent leaves. {ECO:0000269|PubMed:11722756}. |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By salicylic acid and strongly during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | HM859901 | 0.0 | HM859901.1 Malus x domestica WRKY disease resistance protein mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_001280832.1 | 0.0 | probable WRKY transcription factor 7 | ||||
Swissprot | Q9STX0 | 1e-93 | WRKY7_ARATH; Probable WRKY transcription factor 7 | ||||
TrEMBL | A0A498KI84 | 0.0 | A0A498KI84_MALDO; Uncharacterized protein | ||||
TrEMBL | D9ZJF0 | 0.0 | D9ZJF0_MALDO; WRKY domain class transcription factor | ||||
STRING | XP_008340368.1 | 0.0 | (Malus domestica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2177 | 34 | 86 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24240.1 | 2e-85 | WRKY DNA-binding protein 7 |
Link Out ? help Back to Top | |
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Phytozome | MDP0000130716 |