PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MDP0000130173 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
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Family | BES1 | ||||||||
Protein Properties | Length: 429aa MW: 45987 Da PI: 8.0294 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 159.4 | 2.5e-49 | 2 | 77 | 1 | 76 |
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl 76 ++++r+ptwkErEnnk+RERrRRaiaakiy+GLR++Gnyklpk++DnneVlkALc+eAGw+ve+DGttyrkg ++ MDP0000130173 2 TSGTRMPTWKERENNKKRERRRRAIAAKIYSGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEEDGTTYRKGLAQK 77 5899*******************************************************************98765 PP | |||||||
2 | DUF822 | 44.7 | 5.1e-14 | 171 | 252 | 71 | 150 |
DUF822 71 kgskpleeaeaagssasaspesslqsslkssalaspvesysaspksssfpspssldsislasa..asllpvlsvlslvsssl 150 +g+kp ++++++g s+sasp+ss+q s+ +s+ +sp +sy++sp+sssfpsp+++ + + +a +sl+p+l++ls+ sss+ MDP0000130173 171 NGCKPVDRMDIMGGSTSASPCSSYQPSPCASYNPSPGASYNPSPASSSFPSPARYPANGNGNAdaNSLIPWLKTLSSGSSSA 252 59****************************************************99987766566**********9977765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 2.2E-46 | 3 | 76 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Pfam | PF05687 | 5.4E-13 | 171 | 246 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Sequence ? help Back to Top |
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Protein Sequence Length: 429 aa Download sequence Send to blast |
MTSGTRMPTW KERENNKKRE RRRRAIAAKI YSGLRMYGNY KLPKHCDNNE VLKALCNEAG 60 WTVEEDGTTY RKGLAQKRDL CEKRVILLMD LPFLAKFVNA NLRQECVCGG GFEIVMEGTC 120 WGMACRGGAD NQLITCMHPL FDIIAPSFNC VFLLYLGAIS QITSVSPFLV NGCKPVDRMD 180 IMGGSTSASP CSSYQPSPCA SYNPSPGASY NPSPASSSFP SPARYPANGN GNADANSLIP 240 WLKTLSSGSS SATSKLPQLF VQGGSISAPV TPPLSSPTCR TPRTKSDWDE AVAGSNWAGQ 300 HYPFLPSSTP PSPGRQVLPD SGWLAGLQIP QSGPSSPTFS LVSRNPFNLK EALSGGGSRM 360 WTPGQSGTCS PAVAASIDHT GDVPMSDGMA AEFAFGSNTT GLVKPWEGER IEECVSDDLE 420 LTLGSTRTR |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5zd4_A | 1e-20 | 6 | 73 | 372 | 439 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_B | 1e-20 | 6 | 73 | 372 | 439 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_C | 1e-20 | 6 | 73 | 372 | 439 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_D | 1e-20 | 6 | 73 | 372 | 439 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
Search in ModeBase |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Mdo.6243 | 2e-94 | fruit| leaf| stem |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008371512.1 | 1e-166 | BES1/BZR1 homolog protein 4-like | ||||
Refseq | XP_009351745.1 | 1e-166 | PREDICTED: BES1/BZR1 homolog protein 4-like | ||||
Swissprot | Q9ZV88 | 8e-86 | BEH4_ARATH; BES1/BZR1 homolog protein 4 | ||||
TrEMBL | A0A498JVF1 | 1e-165 | A0A498JVF1_MALDO; Uncharacterized protein | ||||
STRING | XP_009351745.1 | 1e-165 | (Pyrus x bretschneideri) | ||||
STRING | XP_008371512.1 | 1e-165 | (Malus domestica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2661 | 33 | 75 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G78700.1 | 7e-73 | BES1/BZR1 homolog 4 |
Link Out ? help Back to Top | |
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Phytozome | MDP0000130173 |