PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000128463
Common NameWRKY11
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family WRKY
Protein Properties Length: 330aa    MW: 35972.7 Da    PI: 10.1464
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000128463genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.25.2e-31259316359
                    -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
           WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                    D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +d  ++++tYegeHnh+
  MDP0000128463 259 DDYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERALDDAAMLVVTYEGEHNHS 316
                    99************************988****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105332.8E-15210255IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.804.9E-32246316IPR003657WRKY domain
PROSITE profilePS5081130.572252318IPR003657WRKY domain
SuperFamilySSF1182902.62E-26255316IPR003657WRKY domain
SMARTSM007741.8E-37257317IPR003657WRKY domain
PfamPF031061.6E-26259315IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    Send to blast
MAVDFMGYRN TISSSSSFSA KLEENAVQEA ASGLESVEKL IRLLSQAQQN QHQGKYPSTA  60
MDMDCRAVAD VAVSKFKKVI SLLGRTRTGH ARFRRAPLTL SSGSSSQTQN QSQEILVKHV  120
PLPLESTKVY HATPIQQIPP PHHHHSTVLE STKDSSTTIN FSYPTTTSFI SSLTGDSDSK  180
QPMSSSSFQI TNLSQVSSAG KPPLSSASLK RKCSSENLGS GKCGAGSSGR CHCKKRKLRQ  240
KRIVRVPAIS LKLADIPPDD YSWRKYGQKP IKGSPHPRGY YKCSSVRGCP ARKHVERALD  300
DAAMLVVTYE GEHNHSLSVA ETSNLILESS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A9e-22245317273WRKY transcription factor 1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.130650.0bud| fruit| leaf| stem
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: In young, mature and senescent leaves. {ECO:0000269|PubMed:11722756}.
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By salicylic acid and strongly during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHM8599010.0HM859901.1 Malus x domestica WRKY disease resistance protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001280832.10.0probable WRKY transcription factor 7
SwissprotQ9STX01e-93WRKY7_ARATH; Probable WRKY transcription factor 7
TrEMBLA0A498KI840.0A0A498KI84_MALDO; Uncharacterized protein
STRINGXP_008340368.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF21773486
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.12e-85WRKY DNA-binding protein 7