PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000127123
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family ERF
Protein Properties Length: 289aa    MW: 31312.7 Da    PI: 5.6367
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000127123genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.48.3e-192372255
            AP2  2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55
                   ++ GVr+++ +grWvAeI+d      ++ r +lg+f+tae+Aa+a+++a+++l+g
  MDP0000127123 23 RFVGVRQRP-SGRWVAEIKD----SlQKVRLWLGTFDTAEDAARAYDEAARALRG 72
                   689******.7*********....4456*************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.108.8E-292380IPR001471AP2/ERF domain
SMARTSM003801.0E-362386IPR001471AP2/ERF domain
CDDcd000182.14E-302380No hitNo description
PfamPF008476.9E-132372IPR001471AP2/ERF domain
PROSITE profilePS5103220.5082380IPR001471AP2/ERF domain
SuperFamilySSF541716.41E-202481IPR016177DNA-binding domain
PRINTSPR003678.2E-82435IPR001471AP2/ERF domain
PRINTSPR003678.2E-84662IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    Send to blast
MGLREQNDGV RRRKKSSTRG HHRFVGVRQR PSGRWVAEIK DSLQKVRLWL GTFDTAEDAA  60
RAYDEAARAL RGVNARTNFE LPQSNGAGNG GAGVAENVPF SFEAVCGNEV EAEGLLGALR  120
AKLQDGKVIN CVLPQPPQGN SGTKAEPSPV DPRGAVAESV NLPPPHKDYP IVLDNQWQLQ  180
VHPAPSNQTM VWANESQVAY EQVHNWSTWP NNSMPYVPEQ CSMELPLPAV GTQLLSQIDG  240
SGGGGDGGWC SDQQQFLHCD GSNWGGANAN WDPPFYASSV RGDGIISYN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A9e-1521881280Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008375527.10.0dehydration-responsive element-binding protein 1E-like
TrEMBLA0A498I7961e-140A0A498I796_MALDO; Uncharacterized protein
STRINGXP_008375527.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF113333035
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.16e-19related to AP2 11