PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000124053
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family G2-like
Protein Properties Length: 304aa    MW: 33787.7 Da    PI: 8.1114
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000124053genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like27.56.8e-092043124
        G2-like  1 kprlrWtpeLHerFveaveqLGGs 24
                   kprl+WtpeLH+rFvea  +LG s
  MDP0000124053 20 KPRLKWTPELHQRFVEAKYRLGKS 43
                   79*******************755 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.4E-81847IPR009057Homeodomain-like
PfamPF143791.2E-2184130IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    Send to blast
MVHQNMQNQN MNLVLSTDAK PRLKWTPELH QRFVEAKYRL GKSQQSENSA DIKQEDYKEI  60
QSSDGHFGAD ISDEDHSQIN ESLQIAQSLQ LQMEVQRKLH EQIEVQRHLQ LRIEAQGKYL  120
QSVLKKAQET LSGYSSSSVG VELAKAELTQ LVSMVNNGCP SSSFSELTET GTSTLKDVER  180
KQMRGSMDSS LTSSESSGRK EEKLPKNSNA TCVELPLMGI HPDNKAWNNS ASNHVFGSKR  240
SSSPISDGVS VKQPVAKRTQ TQRDKGGNHL RKSGLLATFD LNSKYQSDNI DSGPKVIDLN  300
CKGI
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.125144e-64bud| leaf| root| stem
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008389459.10.0myb family transcription factor PHL8-like
SwissprotF4I2742e-57PHL8_ARATH; Myb family transcription factor PHL8
TrEMBLA0A498I7Y20.0A0A498I7Y2_MALDO; Uncharacterized protein
STRINGXP_008389459.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF52183253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69580.12e-58G2-like family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]