PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000119204
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family ERF
Protein Properties Length: 342aa    MW: 38659.5 Da    PI: 4.6111
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000119204genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP245.22.3e-14107154354
            AP2   3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkle 54 
                     kGVr++k +g+++AeI+d + +   r r +lg+f taeeAa+a+ + ++++e
  MDP0000119204 107 PKGVRRRK-WGKYAAEIQDpF-Q---RIRKWLGTFNTAEEAAAAYQQKKREFE 154
                    59***998.**********55.3...5******************99998876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103215.949106170IPR001471AP2/ERF domain
PfamPF008472.5E-8107154IPR001471AP2/ERF domain
PRINTSPR003674.9E-7107118IPR001471AP2/ERF domain
SuperFamilySSF541713.73E-14108153IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.104.5E-18108154IPR001471AP2/ERF domain
SMARTSM003803.7E-12108176IPR001471AP2/ERF domain
CDDcd000181.37E-11108138No hitNo description
PRINTSPR003674.9E-7129145IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    Send to blast
MPGMKTVVLN QHVSWNKLKK KQPAMEENAG YMKRIRIIYN DPDATDYSSE DGEEYDIEGN  60
LFQHCKRFVS EILVVETECE SSAGTNGGKI GHRMGFGDSK KCNRVLPKGV RRRKWGKYAA  120
EIQDPFQRIR KWLGTFNTAE EAAAAYQQKK REFETIQSQQ KIKSRRKNIQ LSDKHEFESS  180
QLMEGAKHEL QGVPLSEEGQ DSSFCHPSPS SVLEISGSAS LSFELEKLKE ESCVEVSGGE  240
GAVQQPVFEE EESIPMLPPL DVEQLNLGCD GNYMYSSLLD QFFDGMCDIV DDGMTDIVDY  300
PVCNDKKGEV ICLPPLDSDF GQQDFSWIDQ KPEQVMPMKF CS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1107113KGVRRRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankGU7324380.0GU732438.1 Malus x domestica AP2 domain class transcription factor (AP2D14) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008360901.20.0ethylene-responsive transcription factor ERF118-like
TrEMBLA0A498I3350.0A0A498I335_MALDO; Uncharacterized protein
STRINGXP_008360901.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF134512027
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.21e-22ERF family protein