PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_AchrUn_randomP17050_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family NAC
Protein Properties Length: 415aa    MW: 46993 Da    PI: 5.8144
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_AchrUn_randomP17050_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM95.96.4e-30732141128
                            NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......lelee....vikev.diykvePwdLpkkvkaeekewyfFskrdkkya 69 
                                    lp+G++F+P+d el+ e+L+ k+  ++      +   +    +++e  +i++++P++Lp  vk++ ++++fF++ +++y 
  GSMUA_AchrUn_randomP17050_001  73 LPAGVKFDPSDAELL-EHLAGKIGLENsklhilI---DefipMLEEDeGICYTHPENLP-GVKKDGSSIHFFHRISNAYG 147
                                    799************.99****988884555442...033333443347**********.67788899************ PP

                            NAM  70 tgkrknra.......tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                                    tg+rk+r+        ++ +W++tgk+k vl+ +g ++g kk++v+y   +r +k+ +++Wvmh+y+l
  GSMUA_AchrUn_randomP17050_001 148 TGRRKRRKinhcalsEERIRWHKTGKTKCVLE-NGVQKGWKKIMVLYksAKRGSKPDRANWVMHQYHL 214
                                    *******8566665544788***********9.999***********4434777888*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.57E-3358233IPR003441NAC domain
PROSITE profilePS5100527.68173233IPR003441NAC domain
PfamPF023651.2E-1274214IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 415 aa     Download sequence    Send to blast
MLIDKNQHEY LFYLSLYPCR TWLITGRGIA RKVKNATFSD NQIKDIGVEA NRECPNCKHL  60
IDNSDVTLDW PGLPAGVKFD PSDAELLEHL AGKIGLENSK LHILIDEFIP MLEEDEGICY  120
THPENLPGVK KDGSSIHFFH RISNAYGTGR RKRRKINHCA LSEERIRWHK TGKTKCVLEN  180
GVQKGWKKIM VLYKSAKRGS KPDRANWVMH QYHLGPEEDE MEGQIVVSKI FCQQPTNQLG  240
TYAMDPVKED NDILNVRVGP RTPKTNTPQP PRLKNDSLHE VNGDSMTILQ GQEQHPVSEV  300
PLSPLPVSQP KGEDETPIWW AGESQAVDEM LPSNFHESLL CHEVLDSFPH YEESSIHLNC  360
TNLDCSRNQT VAAVSSTASG FSDLDNILID TPPDFQLSDL QFGSQESIMS WLDRF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009387344.10.0PREDICTED: NAC domain-containing protein 8-like
TrEMBLM0U9W40.0M0U9W4_MUSAM; Uncharacterized protein
STRINGGSMUA_AchrUn_randomP17050_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21103799
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14490.14e-88NAC domain containing protein 85