PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GSMUA_Achr9P13840_001 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
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Family | WRKY | ||||||||
Protein Properties | Length: 26aa MW: 3035.51 Da PI: 10.2526 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 31.2 | 4.5e-10 | 7 | 25 | 3 | 21 |
-SS-EEEEEEE--TT-SS- CS WRKY 3 DgynWrKYGqKevkgsefp 21 gy+WrKYG+K++kgs +p GSMUA_Achr9P13840_001 7 EGYSWRKYGRKPIKGSAYP 25 79***************99 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50811 | 10.223 | 1 | 26 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.57E-7 | 3 | 25 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 5.1E-8 | 4 | 25 | IPR003657 | WRKY domain |
Pfam | PF03106 | 4.3E-6 | 7 | 25 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 26 aa Download sequence Send to blast |
MIYIPSEGYS WRKYGRKPIK GSAYPS |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G30590.1 | 3e-08 | WRKY DNA-binding protein 21 |