PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr7P04030_001
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family NAC
Protein Properties Length: 285aa    MW: 32265.5 Da    PI: 6.5706
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr7P04030_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM152.22.5e-47301563128
                    NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 
                            pGfrFhPt+eel+++yLk+ v gkkl++ +vi+++++y++ePw+Lp  ++ +e+ewyf+++rd+++a+g r++r+t++g+Wkatg d+
  GSMUA_Achr7P04030_001  30 PGFRFHPTEEELLDFYLKRMVLGKKLQF-DVITSINLYRHEPWELPGLARMGEREWYFYVPRDRRQASGGRPSRTTERGFWKATGCDR 116
                            9**************************9.99***************8778899*********************************** PP

                    NAM  91 evlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                            +v s+   ++l+glkktLv+y+grap+g+ktdWvm+eyrl
  GSMUA_Achr7P04030_001 117 PVRSAtdPKRLIGLKKTLVYYEGRAPRGSKTDWVMNEYRL 156
                            ***98766778***************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100554.52528179IPR003441NAC domain
SuperFamilySSF1019411.31E-5529179IPR003441NAC domain
PfamPF023657.5E-2430156IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    Send to blast
MSSVSLASKG ANKREEVQSM ERGGSGLDLP GFRFHPTEEE LLDFYLKRMV LGKKLQFDVI  60
TSINLYRHEP WELPGLARMG EREWYFYVPR DRRQASGGRP SRTTERGFWK ATGCDRPVRS  120
ATDPKRLIGL KKTLVYYEGR APRGSKTDWV MNEYRLPDPP PSSSDATPKD IVLCKVYRKA  180
TSMKELEQRA AAMEEDMNSG SSMTDSSPGW PDQDSFQLGP PAGVDDEKEE VVAAAGASTR  240
RPSLPELEVP KSSGMEWLQD PFLTQLRSPW LMDFWSPSFN SILNF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A4e-473018519171NO APICAL MERISTEM PROTEIN
1ut4_B4e-473018519171NO APICAL MERISTEM PROTEIN
1ut7_A4e-473018519171NO APICAL MERISTEM PROTEIN
1ut7_B4e-473018519171NO APICAL MERISTEM PROTEIN
3swm_A5e-473018522174NAC domain-containing protein 19
3swm_B5e-473018522174NAC domain-containing protein 19
3swm_C5e-473018522174NAC domain-containing protein 19
3swm_D5e-473018522174NAC domain-containing protein 19
3swp_A5e-473018522174NAC domain-containing protein 19
3swp_B5e-473018522174NAC domain-containing protein 19
3swp_C5e-473018522174NAC domain-containing protein 19
3swp_D5e-473018522174NAC domain-containing protein 19
4dul_A4e-473018519171NAC domain-containing protein 19
4dul_B4e-473018519171NAC domain-containing protein 19
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009408190.10.0PREDICTED: NAC domain-containing protein 35-like
SwissprotQ10S651e-100NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBLM0TEJ30.0M0TEJ3_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr7P04030_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP177038105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.13e-86NAC domain containing protein 36
Publications ? help Back to Top
  1. Hong Y,Zhang H,Huang L,Li D,Song F
    Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice.
    Front Plant Sci, 2016. 7: p. 4
    [PMID:26834774]