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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GSMUA_Achr6P16390_001 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
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Family |
LFY |
Protein Properties |
Length: 417aa MW: 46836.1 Da PI: 10.0577 |
Description |
LFY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GSMUA_Achr6P16390_001 | genome | CIRAD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | FLO_LFY | 570.2 | 5.6e-174 | 1 | 396 | 1 | 386 |
FLO_LFY 1 mdp.eafsaslfkwdpraaaaapparlleeaavseap....leaaaaaaarklreleelfkayGvryltvakiaelGftvstLvdmkd 83
mdp +afsa+++kw+pr+a +p rll+ +++p aaa++++++ relee+f++yGvry+tva+i+elGft+stLv+m++
GSMUA_Achr6P16390_001 1 MDPgDAFSANVYKWEPREAPPHPC-RLLQPLPPPPPPppqpPMAAAQVEEQRPRELEEVFSGYGVRYATVARIGELGFTASTLVGMTE 87
666367***********9885555.44444443333333223334444445588********************************** PP
FLO_LFY 84 eelddlmkslseifrldllvGeryGikaavraerrrlee............eeaekkrrkll....sedeetaldalsqeglseepvq 155
e+dd+m++l+++fr+dll+GeryGikaa+raerrrl + + + +rr ll + +++aldalsqeg
GSMUA_Achr6P16390_001 88 AEVDDMMATLAHLFRWDLLLGERYGIKAALRAERRRLVDsrllrhhrhddnGDGDPRRRLLLpsdhLHGNNNALDALSQEGAPFRSL- 174
***************************************999999999887566788888884433233456********7543322. PP
FLO_LFY 156 eekeaagsggeglgeaelvaaeekkseeekkkaskkkqkrkkkkelkseededeeeeededeegsgedgeerqrehPfivtepgevar 243
++ a s++ ++++e++++ + kk s+ +q+r +kk++ ++ +++++++ +++ erqrehPfivtepgevar
GSMUA_Achr6P16390_001 175 -HIAARLSEEPVQHDKEAAGSGGEAAAGVAKKDSNGRQQRSSKKHK--------SNGHNKKSNKRRSRRAERQREHPFIVTEPGEVAR 253
.223333333333344444444333333333333334443333331........11222233334445679***************** PP
FLO_LFY 244 gkknGLDYLfdLyeqCrefLlqvqkiakerGekcPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkerge 331
+kknGLDYLf+Ly+qCr+fLlqvq++a+e+G+kcPtkvtnqvfryakk+gasyinkPkmrhYvhCYalhcLdeeasnalrrafkerge
GSMUA_Achr6P16390_001 254 AKKNGLDYLFHLYDQCRHFLLQVQALAREHGHKCPTKVTNQVFRYAKKVGASYINKPKMRHYVHCYALHCLDEEASNALRRAFKERGE 341
**************************************************************************************** PP
FLO_LFY 332 nvGawrqacykplvaiaarqgwdidavfnahprLsiWYvPtkLrqLChlerskas 386
nvGawrqacykplvai+ar+gwdidavfnahprLsiWYvPtkLrqLChl+rs+a+
GSMUA_Achr6P16390_001 342 NVGAWRQACYKPLVAISARHGWDIDAVFNAHPRLSIWYVPTKLRQLCHLARSNAN 396
***************************************************9975 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0010077 | Biological Process | maintenance of inflorescence meristem identity |
GO:0010582 | Biological Process | floral meristem determinacy |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0031490 | Molecular Function | chromatin DNA binding |
GO:0042803 | Molecular Function | protein homodimerization activity |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0043621 | Molecular Function | protein self-association |
Sequence ? help Back to Top |
Protein Sequence Length: 417 aa
Download sequence Send
to blast |
MDPGDAFSAN VYKWEPREAP PHPCRLLQPL PPPPPPPPQP PMAAAQVEEQ RPRELEEVFS 60 GYGVRYATVA RIGELGFTAS TLVGMTEAEV DDMMATLAHL FRWDLLLGER YGIKAALRAE 120 RRRLVDSRLL RHHRHDDNGD GDPRRRLLLP SDHLHGNNNA LDALSQEGAP FRSLHIAARL 180 SEEPVQHDKE AAGSGGEAAA GVAKKDSNGR QQRSSKKHKS NGHNKKSNKR RSRRAERQRE 240 HPFIVTEPGE VARAKKNGLD YLFHLYDQCR HFLLQVQALA REHGHKCPTK VTNQVFRYAK 300 KVGASYINKP KMRHYVHCYA LHCLDEEASN ALRRAFKERG ENVGAWRQAC YKPLVAISAR 360 HGWDIDAVFN AHPRLSIWYV PTKLRQLCHL ARSNANASSS SVLAATSDGL PAPPPMF
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor. {ECO:0000250}. |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT5G61850.1 | 1e-104 | floral meristem identity control protein LEAFY (LFY) |