PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr4P13800_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family ERF
Protein Properties Length: 272aa    MW: 29742.6 Da    PI: 5.5529
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr4P13800_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.83.6e-15119166455
                    AP2   4 kGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                            kGVr+++ +g+W+AeIrdp    +r  r +lg++ t e Aa+a+  a+ ++e 
  GSMUA_Achr4P13800_001 119 KGVRQRR-WGKWAAEIRDP----IRgVRLWLGTYATVEAAAEAYRTAACRIEE 166
                            8***998.**********7....246***********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103217.991117174IPR001471AP2/ERF domain
SuperFamilySSF541718.5E-15118164IPR016177DNA-binding domain
PRINTSPR003672.3E-7118129IPR001471AP2/ERF domain
CDDcd000181.12E-14118151No hitNo description
PfamPF008475.1E-10119167IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.8E-20119168IPR001471AP2/ERF domain
SMARTSM003801.6E-17119178IPR001471AP2/ERF domain
PRINTSPR003672.3E-7140156IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    Send to blast
MRRNRKTKKL DQLDSSGSNP TKKSEGSASF EPDLWKKTNG RIEAVRKVRV FFADPEATDS  60
SGEDEDEKLG TRPKKRKRVL YEIALVPAPK ILKPPITSHL KAPPKSVTSC NPAATETQKG  120
VRQRRWGKWA AEIRDPIRGV RLWLGTYATV EAAAEAYRTA ACRIEEEKRG LLHQLWDTWD  180
DGASAASSVS SSCVSAPAPP SPSSVLDVSL SAKGKAVAAA DWLGEPVVPE MEFGLDEEPF  240
LVGELGEDLI GLGDLPLWEQ QLDGGDFSFL DS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009396374.10.0PREDICTED: ethylene-responsive transcription factor ERF118-like
RefseqXP_009396375.10.0PREDICTED: ethylene-responsive transcription factor ERF118-like
TrEMBLM0SNP50.0M0SNP5_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr4P13800_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP50203763
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.22e-17ERF family protein