PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GSMUA_Achr3P03500_001 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
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Family | NAC | ||||||||
Protein Properties | Length: 217aa MW: 24712 Da PI: 8.2339 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 100.3 | 2.7e-31 | 10 | 142 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k...kvkaeekewyfFskrdkkya...tgkrknratk.s 80 +ppGfrFh tdeel+ +yL+kkv+ + ++l +vi+evd++k+ePwd++ + ++ + ++ s + + ++ + + ++++ + s GSMUA_Achr3P03500_001 10 VPPGFRFHHTDEELLYYYLRKKVAYEAIDL-DVIREVDVNKLEPWDIEgSrsaELGVGL-KTCCSSLATRIAStqpELEPTEQQLQvS 95 69****************************.9***************943333222222.3333333333333111222333333314 PP NAM 81 gyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 g + g+dk+++ ++++ +g++ktL fy+grap+g+ktdW+mheyrl GSMUA_Achr3P03500_001 96 G-RAQRGRDKAIHLSNSRRIGMRKTLLFYTGRAPHGQKTDWIMHEYRL 142 5.4789****************************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.18E-33 | 5 | 176 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 33.748 | 10 | 176 | IPR003441 | NAC domain |
Pfam | PF02365 | 5.0E-16 | 11 | 142 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence Send to blast |
MTPSNGQLAV PPGFRFHHTD EELLYYYLRK KVAYEAIDLD VIREVDVNKL EPWDIEGSRS 60 AELGVGLKTC CSSLATRIAS TQPELEPTEQ QLQVSGRAQR GRDKAIHLSN SRRIGMRKTL 120 LFYTGRAPHG QKTDWIMHEY RLDESLDIQK SHFVLRKKSH SGSLEDGWAV CRVFKKKNHQ 180 GVIPPEAILE EDQFNPSKAS GCSPVDHKHN FQKSECI |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor involved in stress response. {ECO:0000250|UniProtKB:Q7F2L3}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009391138.2 | 1e-110 | PREDICTED: LOW QUALITY PROTEIN: NAC domain-containing protein 76-like | ||||
Swissprot | Q5Z6B6 | 5e-60 | NAC76_ORYSJ; NAC domain-containing protein 76 | ||||
TrEMBL | M0SBG8 | 1e-162 | M0SBG8_MUSAM; Uncharacterized protein | ||||
STRING | GSMUA_Achr3P03500_001 | 1e-163 | (Musa acuminata) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G79580.3 | 5e-58 | NAC family protein |
Publications ? help Back to Top | |||
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