PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GSMUA_Achr2P15220_001 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
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Family | bHLH | ||||||||
Protein Properties | Length: 183aa MW: 20058.1 Da PI: 12.2527 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 11.8 | 0.00045 | 121 | 155 | 15 | 54 |
HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++++++ L +l+P + + ls a+ Le+A +Y+ L GSMUA_Achr2P15220_001 121 KVRDRLRALGRLVPGC-----ENLSTASLLEEAADYVAAL 155 7899999********9.....78*************9877 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 5.23E-8 | 121 | 171 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 2.1E-8 | 121 | 169 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 183 aa Download sequence Send to blast |
MIMIMISTDA SAPAKRRTKP SPPENKWRTG ARERAYRSRL LEALRAAGER RASGPRAVKE 60 AADSALALTA RGQSRWSRAV LLRRRSRLLV RAGGRIRRRK RPRRRPVGPT PGTGQPEEGK 120 KVRDRLRALG RLVPGCENLS TASLLEEAAD YVAALEMQVK AMRTLADDLS AAAASGNGRR 180 AEG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 82 | 100 | RRRSRLLVRAGGRIRRRKR |
2 | 94 | 102 | RIRRRKRPR |
3 | 94 | 104 | RIRRRKRPRRR |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009388734.2 | 1e-118 | PREDICTED: transcription factor bHLH149-like | ||||
TrEMBL | M0S863 | 1e-121 | M0S863_MUSAM; Uncharacterized protein | ||||
STRING | GSMUA_Achr2P15220_001 | 1e-122 | (Musa acuminata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1658 | 5 | 8 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G06590.2 | 6e-11 | bHLH family protein |