PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GSMUA_Achr2P07520_001 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
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Family | bZIP | ||||||||
Protein Properties | Length: 218aa MW: 24987 Da PI: 8.4697 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 50.4 | 4.9e-16 | 148 | 192 | 5 | 49 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 +r++r++kNRe+A rsR+RK+a+i++Lee+v +L++ Nk+Lkk+ GSMUA_Achr2P07520_001 148 RRQKRMIKNRESAARSRARKQAYIKQLEEEVMQLTNTNKRLKKQK 192 79****************************************865 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 5.0E-11 | 144 | 216 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.944 | 146 | 194 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.19E-10 | 148 | 194 | No hit | No description |
Pfam | PF00170 | 5.9E-14 | 148 | 193 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 1.55E-18 | 148 | 194 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 2.1E-13 | 148 | 193 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 151 | 166 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence Send to blast |
MNLDELLNSV MAVEQQIQAP SSSSSSSSSS SHKTVDEVWR EIMRHEEQGN TEGAETFGET 60 TLEDFLVRAG AINQQEEWLR YQLTTAQHQQ QSQPMSLLET GLPLFANAVM NAGLCDHQLV 120 VKPASSDSKM TSERQRSDEK TLDKITERRQ KRMIKNRESA ARSRARKQAY IKQLEEEVMQ 180 LTNTNKRLKK QKEEEMALRV TPPSEPRYQL RRTSSAKF |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009389866.2 | 1e-142 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 3 | ||||
TrEMBL | M0S5Z3 | 1e-159 | M0S5Z3_MUSAM; Uncharacterized protein | ||||
STRING | GSMUA_Achr2P07520_001 | 1e-160 | (Musa acuminata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP25478 | 3 | 5 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G41070.3 | 3e-36 | bZIP family protein |