PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr1P18110_001
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family NAC
Protein Properties Length: 217aa    MW: 24632.5 Da    PI: 8.8827
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr1P18110_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM78.71.3e-24411425128
                    NAM  25 gkkleleevikevdiykvePwdLpk.......kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgelvglk 103
                            g+kl++ ++i+++++y+++Pw++ +       ++  +e+ew+f+++rd+k+  g r++r+t++g Wk tg d++v s+   ++l+glk
  GSMUA_Achr1P18110_001   4 GTKLQF-QIITTIHLYRHDPWEIITtfhltaiTACMGEREWHFYVPRDRKQG-GGRPSRTTERGLWKVTGCDRPVRSAtdPKRLIGLK 89 
                            555666.78**************7446676553334899**********975.89*********************98766778**** PP

                    NAM 104 ktLvfykgrapkgektdWvmheyrl 128
                            ktLv+ +grap+g+ +d vm+eyrl
  GSMUA_Achr1P18110_001  90 KTLVYCQGRAPRGTMADRVMNEYRL 114
                            ***********************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100531.4251133IPR003441NAC domain
SuperFamilySSF1019413.4E-282133IPR003441NAC domain
PfamPF023652.8E-729114IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    Send to blast
MIHGTKLQFQ IITTIHLYRH DPWEIITTFH LTAITACMGE REWHFYVPRD RKQGGGRPSR  60
TTERGLWKVT GCDRPVRSAT DPKRLIGLKK TLVYCQGRAP RGTMADRVMN EYRLARELIP  120
TEGVIVLCKI CRKATSMKEL EQRAAAMEEK TSASQVSGSV AVSSPGWSDQ ESFQMTCTYV  180
MDVLCDHTQE EEEVGVPAAD KRRNAIMHQL LILRLGI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-24411439140Stress-induced transcription factor NAC1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009414556.11e-135PREDICTED: NAC domain-containing protein 35-like
SwissprotQ10S659e-57NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBLM0S0W91e-161M0S0W9_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr1P18110_0011e-162(Musa acuminata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.11e-48NAC domain containing protein 36
Publications ? help Back to Top
  1. Hong Y,Zhang H,Huang L,Li D,Song F
    Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice.
    Front Plant Sci, 2016. 7: p. 4
    [PMID:26834774]