 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
GSMUA_Achr1P10080_001 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
|
| Family |
WRKY |
| Protein Properties |
Length: 335aa MW: 36970.7 Da PI: 8.2249 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| GSMUA_Achr1P10080_001 | genome | CIRAD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 95.5 | 3.8e-30 | 204 | 263 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
++Dgy+WrKYGqK+ +++++pr+Y+rC++a +Cpvkkkv+rsaed+++++ tYegeHnh
GSMUA_Achr1P10080_001 204 VKDGYQWRKYGQKVTRDNPCPRAYFRCSFApSCPVKKKVQRSAEDTSMLVATYEGEHNHG 263
58***************************99****************************5 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 335 aa
Download sequence Send
to blast |
MLIDSHIRND ASSMVSPTPF SVSDPSPSPH PMKLIYLPSP SPFRFNSLGR FLLFNSPGRF 60
LLLQLHTEPS YTDSRSMDLA WLDHPSVDLD LTIGSIRFGS EPPAKAKHAD EKFSHGEDQK 120
EVTALEAELG RVNEENMRLK EMLASMAAKY SSLRNQMTGP VSDNTSSEGG TTSDDSCKRI 180
REELKPKVSK LYVRTDPSDT SLVVKDGYQW RKYGQKVTRD NPCPRAYFRC SFAPSCPVKK 240
KVQRSAEDTS MLVATYEGEH NHGQPSQPAG PHGSIRSSVV SGHLSPAPSK PRQEVESPEL 300
RRSLVEQMAV SLTNDPAFKA ALAAAISGRM FQSCS
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription repressor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Represses specifically gibberellic acid (GA)-induced promoters in aleurone cells, probably by interfering with GAM1 (PubMed:15047897). Regulates, probably indirectly, the activation of defense-related genes such as GF14E during defense response (By similarity). Modulates plant innate immunity against X.oryzae pv. oryzae (Xoo) (By similarity). Confers resistance to the virulent bacterial pathogen X.oryzae pv. oryzae (Xoo) 13751, probably via the regulation of NPR1 and PR1b defense signaling pathways (PubMed:16919842). {ECO:0000250|UniProtKB:Q6QHD1, ECO:0000269|PubMed:15047897, ECO:0000269|PubMed:16919842}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: Induced by biotic elicitors (e.g. fungal chitin oligosaccharide and fungal cerebroside elicitors) and pathogen infection (e.g. the compatible pathogenic fungus M.grisea race 007, M.grisea crabgrass BR29). Accumulates in response to M.oryzae (By similarity). Triggered by defense signaling molecules, such as salicylic acid (SA), methyl jasmonate (MeJA), 1-aminocyclo-propane-1-carboxylic acid (ACC), wounding and pathogen infection (e.g. X.oryzae) (PubMed:16919842). Repressed by gibberellic acid (GA) (at protein level) (PubMed:15047897). Induced by abscisic acid (ABA) in aleurone cells, roots and leaves (PubMed:25110688). Accumulates in response to uniconazole, a GA biosynthesis inhibitor. Triggered strongly by cold in leaves, stems and developing spikes, but moderately by drought and salt stresses (By similarity). {ECO:0000250|UniProtKB:Q6QHD1, ECO:0000269|PubMed:15047897, ECO:0000269|PubMed:16919842, ECO:0000269|PubMed:25110688}. |
