PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GSMUA_Achr10P25460_001 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
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Family | bHLH | ||||||||
Protein Properties | Length: 250aa MW: 27832.9 Da PI: 7.7394 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 26.7 | 9.8e-09 | 141 | 188 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++iN ++ Lr+l+P + +k + a +L + ++Y++sLq GSMUA_Achr10P25460_001 141 SHSLAERVRREKINRKMRFLRDLVPGC----CKAMGMAGMLDEIINYVRSLQ 188 8*************************8....567999************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 1.86E-9 | 135 | 192 | No hit | No description |
SuperFamily | SSF47459 | 9.81E-16 | 135 | 201 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 14.78 | 137 | 187 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 3.1E-16 | 138 | 201 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 5.8E-6 | 141 | 188 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 4.6E-8 | 143 | 193 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence Send to blast |
MEEFLEDSGL ELTRKFPELE GPAMENSSLE LMCYPQQNCL SHQPEFSMPS VDNLLSSMVT 60 PVSHAMVSAG QQSHGDQKMK VTAEPVFGLS LDCSNSGEKS SVLNILLQSC GIKKRGRSLQ 120 RASEPKEVVH VRARRGEATD SHSLAERVRR EKINRKMRFL RDLVPGCCKA MGMAGMLDEI 180 INYVRSLQNQ VELLSMEIAA AASSYDNSWV ETPQVMKLIR GFRSHRGSRE KGLRTEYVEC 240 FACSATKLAG |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018674735.1 | 1e-158 | PREDICTED: transcription factor BEE 1-like | ||||
TrEMBL | M0RLC0 | 0.0 | M0RLC0_MUSAM; Uncharacterized protein | ||||
STRING | GSMUA_Achr10P25460_001 | 0.0 | (Musa acuminata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP15639 | 6 | 15 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G25330.1 | 1e-39 | bHLH family protein |