PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GSMUA_Achr10P02060_001 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
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Family | WRKY | ||||||||
Protein Properties | Length: 97aa MW: 11238 Da PI: 8.6486 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 62 | 1e-19 | 2 | 47 | 15 | 59 |
-TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 15 vkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 kg+++pr+YYrCt+a gCpv+k+v+r+ae + ++++tYeg+Hnh+ GSMUA_Achr10P02060_001 2 AKGNPCPRAYYRCTMAnGCPVRKQVQRCAEVKIILTTTYEGNHNHP 47 59*************999***********999999**********7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00774 | 9.4E-16 | 1 | 48 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 20.3 | 1 | 49 | IPR003657 | WRKY domain |
Pfam | PF03106 | 6.9E-17 | 2 | 47 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 2.35E-16 | 2 | 49 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 6.1E-19 | 2 | 49 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 97 aa Download sequence Send to blast |
MAKGNPCPRA YYRCTMANGC PVRKQVQRCA EVKIILTTTY EGNHNHPLPP CCRCHGQHHV 60 SHCRRAHIWL HGRWFLHAQC LHHGDTVCFL DVQFCHP |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. | |||||
UniProt | Transcription factor involved in the control of processes related to senescence and pathogen defense (PubMed:12000796). Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (PubMed:12000796). Activates the transcription of the SIRK gene and represses its own expression and that of the WRKY42 genes (PubMed:12000796). Modulates phosphate homeostasis and Pi translocation by regulating PHO1 expression (PubMed:25733771). {ECO:0000269|PubMed:12000796, ECO:0000269|PubMed:25733771}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By salicylic acid, ethylene, jasmonic acid, pathogens, wounding and strongly during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002515176.1 | 4e-29 | probable WRKY transcription factor 47 | ||||
Refseq | XP_019457417.1 | 5e-29 | PREDICTED: probable WRKY transcription factor 31 | ||||
Swissprot | Q93WT0 | 8e-29 | WRK31_ARATH; Probable WRKY transcription factor 31 | ||||
Swissprot | Q9C519 | 7e-29 | WRKY6_ARATH; WRKY transcription factor 6 | ||||
TrEMBL | M0REN3 | 7e-66 | M0REN3_MUSAM; Uncharacterized protein | ||||
STRING | GSMUA_Achr10P02060_001 | 1e-66 | (Musa acuminata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP4358 | 32 | 60 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G62300.1 | 3e-31 | WRKY family protein |