PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lus10041709
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
Family EIL
Protein Properties Length: 512aa    MW: 57294.6 Da    PI: 4.447
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lus10041709genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3350.92.6e-107413711353
                  XXXXXXXXXXXXXXXXXXXXXXX..XXXXX......XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
         EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaa.....tgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLra 93 
                  ++lkkrmwkd+ +l++l+e++   + +  ++       +++snk  e++rrkk++raQD+iLkYM+k+mevc+ qGfvYgiipe gkpv+g+sdsLr+
  Lus10041709  41 DDLKKRMWKDRLRLQKLEEKRGTTTTSTGSSkelitKPQSSSNKQLEASRRKKTARAQDSILKYMVKIMEVCQGQGFVYGIIPERGKPVSGSSDSLRH 138
                  79******************99877666655677543345567999**************************************************** PP

                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT.--TT- CS
         EIN3  94 WWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelg.lskdq 190
                  WWk+    d  +p a+ + q+  l ++       ++ +   +l elqDTtlgSL salmqhc ppqrrfple+g++pPWWPtG+e ww+e+g ++k++
  Lus10041709 139 WWKD----D--APEAVFQFQSSTLSPA--AVA--AAAAALPRLYELQDTTLGSLISALMQHCVPPQRRFPLERGLAPPWWPTGDENWWEEQGvAAKEH 226
                  ****....4..5999999977666655..333..468899****************************************************999999 PP

                  -.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
         EIN3 191 gtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahssslrkqspkvtlsceqkedvegkk 288
                  g+ppy+kphdlkk wkvs+Ltavikhm+p++ ++r+l+  sk+lqdkm+a es+++++v++qee+++ +         k  +++ +s+          
  Lus10041709 227 GPPPYRKPHDLKKSWKVSLLTAVIKHMAPDFRRMRRLVSHSKCLQDKMTASESAIWSNVVSQEESLLSE---------KLTNNLHISETVGS---AST 312
                  9***************************************************************97732.........23344444444222...111 PP

                  XXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXXX CS
         EIN3 289 eskikhvqavkttagfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsisqne 353
                   s   ++ + +++++  +v       ++++ ++++ev++ c+++ +++s+  l+f+dkn +s ++
  Lus10041709 313 SS---AIIKPEKRKKSRFVISEA---EDEEETETEEVVYPCRNEMCPQSKLGLGFSDKNTRSVHQ 371
                  22...222222223344444443...456666677899***********************9998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048732.9E-10641290No hitNo description
Gene3DG3DSA:1.10.3180.108.5E-66167296IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167681.83E-57170292IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 512 aa     Download sequence    Send to blast
MVVIHGEIEV VEEAEEMELD EAEEADQEPE EEEDDDSISY DDLKKRMWKD RLRLQKLEEK  60
RGTTTTSTGS SKELITKPQS SSNKQLEASR RKKTARAQDS ILKYMVKIME VCQGQGFVYG  120
IIPERGKPVS GSSDSLRHWW KDDAPEAVFQ FQSSTLSPAA VAAAAAALPR LYELQDTTLG  180
SLISALMQHC VPPQRRFPLE RGLAPPWWPT GDENWWEEQG VAAKEHGPPP YRKPHDLKKS  240
WKVSLLTAVI KHMAPDFRRM RRLVSHSKCL QDKMTASESA IWSNVVSQEE SLLSEKLTNN  300
LHISETVGSA STSSAIIKPE KRKKSRFVIS EAEDEEETET EEVVYPCRNE MCPQSKLGLG  360
FSDKNTRSVH QLECAYPAKS PEDTSRENSG SEDYPSVVCS STVSLLSTDQ SSSQLLSPRE  420
LSVTDWANMV LESANVYDPP LETGEGVAEY WTSERSGGIE ELGYEMQERG GEEEELDLNL  480
QPWSSLDDRN GVADTTSIWD LGYEEPASPP N*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A5e-571712956129Protein ETHYLENE INSENSITIVE 3
4zds_B5e-571712956129Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapLus10041709
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021632559.11e-134putative ETHYLENE INSENSITIVE 3-like 4 protein
SwissprotQ9LX161e-117EIL4_ARATH; Putative ETHYLENE INSENSITIVE 3-like 4 protein
TrEMBLA0A2C9US901e-132A0A2C9US90_MANES; Uncharacterized protein
STRINGLus100417090.0(Linum usitatissimum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF32234200
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10120.11e-114EIL family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Jeong HJ,Choi JY,Shin HY,Bae JM,Shin JS
    Seed-specific expression of seven Arabidopsis promoters.
    Gene, 2014. 553(1): p. 17-23
    [PMID:25261846]