PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Lus10041709 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
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Family | EIL | ||||||||
Protein Properties | Length: 512aa MW: 57294.6 Da PI: 4.447 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 350.9 | 2.6e-107 | 41 | 371 | 1 | 353 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX......XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaa.....tgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLra 93 ++lkkrmwkd+ +l++l+e++ + + ++ +++snk e++rrkk++raQD+iLkYM+k+mevc+ qGfvYgiipe gkpv+g+sdsLr+ Lus10041709 41 DDLKKRMWKDRLRLQKLEEKRGTTTTSTGSSkelitKPQSSSNKQLEASRRKKTARAQDSILKYMVKIMEVCQGQGFVYGIIPERGKPVSGSSDSLRH 138 79******************99877666655677543345567999**************************************************** PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT.--TT- CS EIN3 94 WWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelg.lskdq 190 WWk+ d +p a+ + q+ l ++ ++ + +l elqDTtlgSL salmqhc ppqrrfple+g++pPWWPtG+e ww+e+g ++k++ Lus10041709 139 WWKD----D--APEAVFQFQSSTLSPA--AVA--AAAAALPRLYELQDTTLGSLISALMQHCVPPQRRFPLERGLAPPWWPTGDENWWEEQGvAAKEH 226 ****....4..5999999977666655..333..468899****************************************************999999 PP -.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 191 gtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahssslrkqspkvtlsceqkedvegkk 288 g+ppy+kphdlkk wkvs+Ltavikhm+p++ ++r+l+ sk+lqdkm+a es+++++v++qee+++ + k +++ +s+ Lus10041709 227 GPPPYRKPHDLKKSWKVSLLTAVIKHMAPDFRRMRRLVSHSKCLQDKMTASESAIWSNVVSQEESLLSE---------KLTNNLHISETVGS---AST 312 9***************************************************************97732.........23344444444222...111 PP XXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXXX CS EIN3 289 eskikhvqavkttagfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsisqne 353 s ++ + +++++ +v ++++ ++++ev++ c+++ +++s+ l+f+dkn +s ++ Lus10041709 313 SS---AIIKPEKRKKSRFVISEA---EDEEETETEEVVYPCRNEMCPQSKLGLGFSDKNTRSVHQ 371 22...222222223344444443...456666677899***********************9998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 2.9E-106 | 41 | 290 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 8.5E-66 | 167 | 296 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 1.83E-57 | 170 | 292 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 512 aa Download sequence Send to blast |
MVVIHGEIEV VEEAEEMELD EAEEADQEPE EEEDDDSISY DDLKKRMWKD RLRLQKLEEK 60 RGTTTTSTGS SKELITKPQS SSNKQLEASR RKKTARAQDS ILKYMVKIME VCQGQGFVYG 120 IIPERGKPVS GSSDSLRHWW KDDAPEAVFQ FQSSTLSPAA VAAAAAALPR LYELQDTTLG 180 SLISALMQHC VPPQRRFPLE RGLAPPWWPT GDENWWEEQG VAAKEHGPPP YRKPHDLKKS 240 WKVSLLTAVI KHMAPDFRRM RRLVSHSKCL QDKMTASESA IWSNVVSQEE SLLSEKLTNN 300 LHISETVGSA STSSAIIKPE KRKKSRFVIS EAEDEEETET EEVVYPCRNE MCPQSKLGLG 360 FSDKNTRSVH QLECAYPAKS PEDTSRENSG SEDYPSVVCS STVSLLSTDQ SSSQLLSPRE 420 LSVTDWANMV LESANVYDPP LETGEGVAEY WTSERSGGIE ELGYEMQERG GEEEELDLNL 480 QPWSSLDDRN GVADTTSIWD LGYEEPASPP N* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4zds_A | 5e-57 | 171 | 295 | 6 | 129 | Protein ETHYLENE INSENSITIVE 3 |
4zds_B | 5e-57 | 171 | 295 | 6 | 129 | Protein ETHYLENE INSENSITIVE 3 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Putative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Lus10041709 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021632559.1 | 1e-134 | putative ETHYLENE INSENSITIVE 3-like 4 protein | ||||
Swissprot | Q9LX16 | 1e-117 | EIL4_ARATH; Putative ETHYLENE INSENSITIVE 3-like 4 protein | ||||
TrEMBL | A0A2C9US90 | 1e-132 | A0A2C9US90_MANES; Uncharacterized protein | ||||
STRING | Lus10041709 | 0.0 | (Linum usitatissimum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF322 | 34 | 200 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G10120.1 | 1e-114 | EIL family protein |
Link Out ? help Back to Top | |
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Phytozome | Lus10041709 |
Publications ? help Back to Top | |||
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