PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lus10031951
Organism
Linum usitatissimum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
Family NAC
Protein Properties Length: 199aa    MW: 22525.6 Da    PI: 4.5183
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lus10031951genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM45.32.8e-14134197260
          NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpkkvka....eekewyf 60 
                  p+GfrFhP+deelv  yL kk++g++l+++++++++d+y ++ePwd+ +k+++    +e+e+yf
  Lus10031951 134 PAGFRFHPKDEELVLLYLLKKLRGRPLPCASAVRDCDLYgELEPWDIWSKYHHhgddDEEEIYF 197
                  89***************************999*****99457*****74222223323446676 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.05E-14123197IPR003441NAC domain
PROSITE profilePS5100516.518133198IPR003441NAC domain
PfamPF023654.0E-6134184IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    Send to blast
MDEHVYFDFD ELSYPEEYKL NMVALFASLP SLEQLNLARQ LLLLESNLNH PESVGSLTKL  60
LEAEDCGGVV CVQHLQELNI KGSLGMKVEL DLGKLSVSTS LPTILTYSVS TFLSRNSARV  120
PKTTMEFDDG FGRPAGFRFH PKDEELVLLY LLKKLRGRPL PCASAVRDCD LYGELEPWDI  180
WSKYHHHGDD DEEEIYFL*
Cis-element ? help Back to Top
SourceLink
PlantRegMapLus10031951
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
STRINGLus100319511e-144(Linum usitatissimum)