PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Lus10031884 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
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Family | ZF-HD | ||||||||
Protein Properties | Length: 90aa MW: 9096.19 Da PI: 8.5023 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 28.7 | 3.2e-09 | 8 | 29 | 4 | 25 |
ZF-HD_dimer 4 vrYkeClkNhAaslGghavDGC 25 +YkeCl+NhAaslG++a+ G Lus10031884 8 EVYKECLRNHAASLGSYATGGW 29 58****************9986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04770 | 1.5E-5 | 9 | 28 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
ProDom | PD125774 | 6.0E-4 | 10 | 30 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 90 aa Download sequence Send to blast |
MEGEVDAEVY KECLRNHAAS LGSYATGGWG GVSSPFPFSL PLPPSPPPSN APPVAATATS 60 TAKSTTTKPT PASSSPVPPS SMTNIRLRQ* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Lus10031884 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
STRING | Lus10031884 | 2e-56 | (Linum usitatissimum) |
Link Out ? help Back to Top | |
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Phytozome | Lus10031884 |